Epinephelus fuscoguttatus (brown-marbled grouper): 125904357
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Entry
125904357 CDS
T08419
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03320
PPAR signaling pathway
efo04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
125904357 (rxrba)
03320 PPAR signaling pathway
125904357 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125904357 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
efo03310
]
125904357 (rxrba)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
125904357 (rxrba)
Nuclear receptors [BR:
efo03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
125904357 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
125904357
NCBI-ProteinID:
XP_049457644
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Position
LG17:11783673..11813045
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AA seq
470 aa
AA seq
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MGDSRDSRSPDSSSVSSPPSGQRSPPLVPSAAASMTSLPPITTTGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPLGLKQLSSHSPGPM
LSQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCMVDKRQRNRCQ
YCRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAV
EQKTELHADGTSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELALDDQVILLRAG
WNELLIASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVHNAEVGAIFDRVLTE
LVSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLESYCKQKYPDQQ
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagcagagattcccgcagcccagatagctcgtctgtgtcttcccctccatca
ggacagcgctcacctccactggttccctcagctgcagcttccatgacctccctgcctccc
atcaccaccactggagtcaacagccccatcagtagcatcggctcccccttttctgttatc
agctcttcactgggctcgccatgcctacctggcacgccatcggtgggctacggccccatc
agcagcccacagatcaactcaacagtgtccatgtcagggctccatgcagtgagcagctca
gatgacgtgaaacctccgttgggcttgaagcagctgtcgtcccacagcccagggccaatg
ctttcccagaaacgcctttgttccatctgcggagacagatcctctggtaagcactacggt
gtctacagctgtgaaggctgtaaaggcttcttcaagcgcacagtgcgcaaagacttgacc
tacacctgtcgggacaataaagactgtatggtggataagagacagaggaaccgctgccag
tactgccgctaccagaagtgcctggccatgggcatgaaaagagaagtggccaagatgaac
gacagatctgtccaagaggaacggcagaggaacaaggaacgagagggcgaggtggagtcg
actagtgcggtgaatgaggagatgccagtggagaaaatattggaagcggagatggctgta
gagcagaagacagagcttcatgcagatggaacttcaggtggcagctctcccaacgatcct
gtcaccaacatctgtcaggcagcagataagcagctcttcaccttggtggagtgggctaag
aggatccctcacttctctgagctagccctggacgaccaggtcatcctgctacgtgcaggc
tggaatgaactcctgattgcatcgttctcccatcgctccatctcggtgaaggacgggatt
ttattggccactggcctgcatgttcacaggaacagtgctcacagtgcaggtgttggagcc
atctttgacagggtgcacaatgccgaggttggggccatatttgacagggttttgacagag
cttgtaagcaagatgagagacatgcaaatggacaagacagagctgggctgccttcgagcc
atcatcctcttcaacccagatgccaagggtttgtctaaccccagtgaggtggagctcctg
agagagagggtgtacgcatcgctggagtcttattgcaaacagaaataccccgatcagcag
ggcaggtttgcaaagctcctcctccggctcccagcactgcgctccattggtctaaagtgc
ctggagcacctgttcttctttaaactgattggtgacacgcccatcgacaccttcctgatg
gagatgctggaggcgcctcaccagctcacctag
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