Epinephelus fuscoguttatus (brown-marbled grouper): 125904420
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Entry
125904420 CDS
T08419
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04514
Cell adhesion molecules
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125904420 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125904420 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
efo00535
]
125904420 (sdc3)
Proteoglycans [BR:
efo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
125904420 (sdc3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
125904420
NCBI-ProteinID:
XP_049457764
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Position
LG17:26070683..26121604
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AA seq
456 aa
AA seq
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MKLPWLLALTALLAHTATGQTWSPSIDDEGSTRDEFYDDEDLYSGSGSGFPEVSVRPTSA
GVSFTTEEPLLLSTTQATSPAPSASPAAEPSPNPEDATTTPLPTEADGESGAFWEREREL
ERERELERERDKEQERQRELEREKERERQLERERERERERERVREMERERERERERERER
EREREREKERERQRERELERERELERIRAAAAQTTAAPRSPSAIPMVTTNPAISSAESAV
PSAGSDDLSTTEEEEDVYLSPEPTAFFPGFDMDTTTEEDTSTTAETTPEPTTAAPTTTTA
ATTVKTRVPFKPRVPMTTATQAVPTERTTRAQQPTSTQEGNNEAGAAGPSGDFEIRDDRR
NDLGRGIMPVDPDLIGNTVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVML
LVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccctggctactggcgctcacggcgctgctcgctcacaccgccacgggacag
acttggtcgccgtctatcgatgacgaaggctcgacgagagacgagttctacgacgatgag
gacctctactcgggctctggctctggctttcctgaggtcagtgtgaggccgacatcggcg
ggagtgtccttcacgacagaagagcccctcctcctctccaccacccaggccaccagcccc
gccccctccgcctcacctgcagctgagcccagccccaacccagaggacgccaccaccacc
ccactgcccactgaggccgatggagagagcggtgcattctgggaaagagagagggagctt
gagagggagagggagttggagagggagagagataaagagcaggagcgtcagagggagctg
gagagggagaaggagagggagagacagctggagagggagcgggagagggaaagagagagg
gagcgggtccgagagatggagagagagagggagagggagagagagcgcgagcgagagagg
gaacgtgagagagaacgagagaaggagagagagaggcagagagagcgtgagcttgaaaga
gagagagagctggagcgaatcagggccgctgccgcgcagaccaccgccgccccacgatcc
ccctctgccatccccatggtgaccaccaacccggcaatcagctctgcagaaagcgcagtg
ccctctgctggttcagatgacctgagcaccaccgaagaagaagaggacgtctacctgtca
ccggaacccactgcgtttttcccgggcttcgacatggacaccaccacagaggaagacacg
tccaccacagcagagaccacccctgagcccacgacagctgcacctaccaccaccactgcc
gccaccactgtcaagaccagggtccccttcaagcccagggttcccatgacgacagccact
caggcagtgccgacagagagaacgacccgcgcacagcagcctacatcgacacaggagggt
aacaacgaggcaggagcagcagggccgagtggagatttcgagatccgtgatgatcggcgt
aatgaccttggtcgaggtataatgccagtggatcctgatctgatcggtaacacagtagat
ggaggaagctctgctgcccagctgccacagaagaacatcctggagagaaaagaagtctta
atagcggtgatagtgggaggagtcgtgggcgccttgtttgctgccttcctggtgatgttg
ctggtgtacaggatgaagaagaaggacgagggcagctacacgctggaggaacccaaacag
gcaaccgtcacctaccagaaaccagacaagcaggaggagttttacgcataa
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