KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125904433
Entry
125904433         CDS       T08419                                 
Symbol
smarcc1b
Name
(RefSeq) SWI/SNF complex subunit SMARCC1b
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:efo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125904433 (smarcc1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:efo03021]
    125904433 (smarcc1b)
   03036 Chromosome and associated proteins [BR:efo03036]
    125904433 (smarcc1b)
Transcription machinery [BR:efo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     125904433 (smarcc1b)
Chromosome and associated proteins [BR:efo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    125904433 (smarcc1b)
   PBAF complex
    125904433 (smarcc1b)
   GBAF(ncBAF) complex
    125904433 (smarcc1b)
SSDB
Motif
Pfam: SWIRM-assoc_2 SWIRM SWIRM-assoc_1 Myb_DNA-binding SWIRM-assoc_3 Myb_DNA-bind_6 SpeFL DUF919
Other DBs
NCBI-GeneID: 125904433
NCBI-ProteinID: XP_049457778
LinkDB
Position
LG17:complement(27199086..27207774)
AA seq 955 aa
MATMSGGTNLGIPGTSQTSSGSSAHRKKDSSPSARFWESPDTLAQLEVVRQWIGKHYKKY
VLVDAPSCQALAAVTLQLLQFQEDAFGRQATSPALTKLPAQCFLDLRPGGGLCHIVGTAY
KFKAEQGWRRFDLQNPSRTERNVEMFGTIERALIQNKCMSLPVVYMDPTLDQELISRLTE
VITKHQGTLTEDRTLASHHICPSLASTEEDDWMRPVMRKDKHVLVHWGMHPDSYDSWLSS
SDVEGEVEEPPHSEKPWRVHAGWVLDTDVFNEWMNEEDYCVDDRNEPIILRRRIHLRDDQ
DAKPTPSKKRRRSPSPPSSEGRKKGKKGRRRGQQEEEPEEDLTKDMEDPTPVPNMEEVIL
PKNVNLKKDSENTPVKGGTMADLDEQEEDFPGREDEEGRAEIPRLSEGEDNITEQTHHII
IPSYTSWFNYNSIHSIEKRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPQEYLSSTS
CRRNLTGDVCAVMRVHAFLEQWGLINYQVDAESRPLPMGPPPTPHFNVLADTPSGLAPLQ
HKPLQVSASQHMLYFPEKSREKPSDCQNFGLRSDIYTKKHPKTKGASAGREWTEQETLLL
LEALEVYRDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSASLGPLAYQPVPFSQS
ENPVMSTVAFLASVVDPRVASSAAKAALEEFSRVQEESVDKVSETSNQPDKTESMDTEKG
EMNSTSHQVPLRADGLKVEPSGAKAEGELVKRENAENALAEERDGKGDDDESIERGDVDE
ARVMEQDLVEGSVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRH
FEELETIMDREKEALEQQRQQLLSERQTFHTEQLKQAEMKVRQQREQHGQPGYTMQQSAL
PAPSGQSMPNRMMPGGGNAQTMASRHPGAPNGMYPSSQPDGIAPAQPGPPVSSHS
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggccacaatgtccggaggaacaaaccttggcattcccgggacgagccaaaccagctcc
ggatcatccgcacaccggaaaaaggatagcagtccgtccgctaggttctgggagagtccg
gatactttagcccagctggaggtggtgcgacagtggatcgggaagcactacaaaaagtat
gtgctggtggatgctccatcatgtcaggctctggctgcagtgaccctgcagcttcttcag
tttcaagaggatgcctttggcagacaagctaccagtcctgctctcaccaaacttcctgca
cagtgcttcctggacctgcggccgggaggtggactctgccacattgttggcactgcctac
aagttcaaggctgagcagggctggcggaggtttgacttgcagaatccatccagaaccgaa
aggaatgttgagatgtttggtactatcgaaagagcgctgatacagaacaagtgtatgtca
ctgcctgtggtatacatggaccctacactggatcaggagctgattagcagacttacagag
gttatcaccaaacaccagggtacactcactgaggacagaacgctcgccagtcaccacatc
tgcccctcacttgcttccacagaggaagatgattggatgcgtcctgtcatgcggaaggac
aaacatgttttggtccactggggcatgcaccctgacagttacgacagttggctgtcctca
agtgatgttgaaggagaggttgaagagccaccacattcagaaaagccgtggcgggtccat
gctggctgggttctggacacagatgttttcaacgagtggatgaacgaagaagactattgt
gtggatgacaggaatgaaccgataattctccgccggcgtattcacctcagagacgaccag
gacgccaaacccaccccctccaaaaagagaagacgttccccctctcctccctcctctgaa
ggcaggaagaaaggaaagaaggggagaaggcgtggacaacaggaggaggagccagaagag
gacttgaccaaagacatggaggaccctacccctgttcctaacatggaggaggttatccta
cccaaaaatgtcaacctgaagaaggacagtgagaatactcctgtcaaaggagggaccatg
gctgaccttgatgaacaggaggaggatttcccaggaagggaggatgaggaggggagagcg
gagatacctcgtctgtcagagggagaggataacatcacagaacaaacacatcacatcata
ataccaagctacacatcttggttcaactacaacagcattcactcgatagagaaacgtgca
ttgcctgagtttttcaatggaaaaaacaagtccaaatctccagaaatctacctggcatac
cgtaacttcatgatcgacacatatcggctcaacccccaggaatatctcagctcaacgtcc
tgcagacgcaacctcactggagacgtctgtgctgtcatgagggttcatgcatttttggag
cagtggggcttgattaactaccaggtggatgcagagagcagacccctccccatgggaccc
ccacctactcctcatttcaacgtactggctgacacaccgtctgggctggcccccctgcaa
cacaaacccctgcaggtgtcagcctcgcagcacatgttgtatttcccagagaagagcaga
gagaagccttcagactgccagaactttggtctgcgctccgacatctacaccaagaaacac
cccaagactaaaggagcgagtgcgggaagggaatggacagagcaagagacgctcttgctg
ttagaggccttagaggtctacagagacgactggaacaaagtatcggagcatgtgggctcc
agaacgcaggacgagtgtatcctccacttcctgcgtcttccaatagaagacccttaccta
gaggactcctcggcctccctcggcccactggcataccagcctgtgcctttcagccaatcg
gaaaaccccgttatgagcactgtggccttcctggcatccgtggtggacccacgggtggcg
tcgtcggcagctaaggccgcactagaggagttttcccgagtgcaggaggagtcagtggat
aaagtctctgaaacgtccaaccagcctgacaaaacagagtcgatggatacagaaaaaggt
gaaatgaactccacctcccatcaggtccctttaagggcagatgggctcaaggtggagccc
agtggggccaaagcggagggagaactggtcaaaagagaaaatgccgaaaatgcacttgcg
gaagagagagacgggaagggagatgatgatgagagcatagagcggggagatgtggatgag
gcgagagtgatggagcaggatctggtggagggcagcgttgccacggcagcagcagctgct
ctggcctcagctgccacaaaggccaagcacttggccgcagtagaggagaggaagatcaag
tccctggtggctctgttggtggagacccagatgaagaagctggagatcaaactgaggcac
tttgaggagctggagaccatcatggaccgtgagaaagaggctctggagcagcagcggcag
cagctcctgtcagagagacagaccttccacactgagcagctcaaacaggcagagatgaag
gttcgccagcagagggagcagcatggtcagccgggatacacaatgcagcaatcagccctg
cctgctccctcaggccagtccatgcccaaccgcatgatgcctggtggaggaaacgcccag
acaatggcctctcgacaccctggagctcccaatggcatgtatccgtcctcacagcctgat
gggatagcaccagctcagccgggtcctcctgtgtccagccacagctga

DBGET integrated database retrieval system