KEGG   Epinephelus fuscoguttatus (brown-marbled grouper): 125904625
Entry
125904625         CDS       T08419                                 
Symbol
rhoca
Name
(RefSeq) ras homolog family member Ca
  KO
K04513  Ras homolog gene family, member A
Organism
efo  Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04081  Hormone signaling
efo04144  Endocytosis
efo04150  mTOR signaling pathway
efo04270  Vascular smooth muscle contraction
efo04310  Wnt signaling pathway
efo04350  TGF-beta signaling pathway
efo04510  Focal adhesion
efo04517  IgSF CAM signaling
efo04520  Adherens junction
efo04530  Tight junction
efo04621  NOD-like receptor signaling pathway
efo04625  C-type lectin receptor signaling pathway
efo04810  Regulation of actin cytoskeleton
efo05100  Bacterial invasion of epithelial cells
efo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:efo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    125904625 (rhoca)
   04350 TGF-beta signaling pathway
    125904625 (rhoca)
   04150 mTOR signaling pathway
    125904625 (rhoca)
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    125904625 (rhoca)
   04517 IgSF CAM signaling
    125904625 (rhoca)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125904625 (rhoca)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125904625 (rhoca)
   04520 Adherens junction
    125904625 (rhoca)
   04530 Tight junction
    125904625 (rhoca)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125904625 (rhoca)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    125904625 (rhoca)
   04625 C-type lectin receptor signaling pathway
    125904625 (rhoca)
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    125904625 (rhoca)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125904625 (rhoca)
   05100 Bacterial invasion of epithelial cells
    125904625 (rhoca)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:efo04131]
    125904625 (rhoca)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:efo04147]
    125904625 (rhoca)
   04031 GTP-binding proteins [BR:efo04031]
    125904625 (rhoca)
Membrane trafficking [BR:efo04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    125904625 (rhoca)
Exosome [BR:efo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125904625 (rhoca)
  Exosomal proteins of other body fluids (saliva and urine)
   125904625 (rhoca)
  Exosomal proteins of colorectal cancer cells
   125904625 (rhoca)
  Exosomal proteins of bladder cancer cells
   125904625 (rhoca)
GTP-binding proteins [BR:efo04031]
 Small (monomeric) G-proteins
  Rho Family
   RhoA/B/C [OT]
    125904625 (rhoca)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA SRPRB VASP_tetra
Other DBs
NCBI-GeneID: 125904625
NCBI-ProteinID: XP_049458164
LinkDB
Position
LG1:15745110..15769949
AA seq 193 aa
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
LRNDEHTRRELAKMKQEPVKTEEGRDMAGRISAFGYLECSAKTKDGVREVFEMATRAALQ
VRKRKKRGGCTLL
NT seq 582 nt   +upstreamnt  +downstreamnt
atggcagccattcggaagaagctggtgattgtcggggacggagcttgcgggaaaacatgt
cttctcattgttttcagtaaagaccagtttcctgaagtctacgtcccaacagtgttcgag
aactacatcgctgatatcgaggttgatggaaaacaggtggagttggcgctgtgggatact
gcaggccaagaggactacgacaggttgaggcctctctcctaccctgacacagatgtcatc
ctcatgtgtttctccattgacagcccagacagtttagaaaatatccctgagaagtggacg
cccgaggtaaagcacttctgtcccaatgttcccatcatcctggtggggaacaagaaggac
ctgaggaacgatgagcacacacggagagagctggccaagatgaagcaggagccggtgaag
acagaggaaggcagagacatggccggcaggatcagcgcttttggctacttggagtgctcg
gccaagaccaaggacggtgttcgggaagtgttcgagatggccaccagagcggcgctgcag
gtcaggaagcgcaagaagagaggtggctgcacgctgctgtga

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