Epinephelus fuscoguttatus (brown-marbled grouper): 125904692
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Entry
125904692 CDS
T08419
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125904692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125904692
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125904692
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125904692
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
7tm_6
Motif
Other DBs
NCBI-GeneID:
125904692
NCBI-ProteinID:
XP_049458234
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Position
LG17:complement(11279668..11329659)
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AA seq
936 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRHHI
RMLETILRMLDNDSVQVDAIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQTLVA
TSPPGHSHMEDEIFQHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSSSSSSSVSGLTSSSLVSMATIAAGGLSSSGGNSHH
GSSGGLLSNTSAGSYSNATQQQPHPSAQQQQAKNLVSSTSSTPISIPITSTNSHLVSSAP
SPPNAITQGLFTSTSQPQSLSGHTPTSNSLGLSLGLSLGKGGMSSSITTSPMSGSLGLSG
MPASLSTMASLLSGSTPAPYAQAAASGAIGSGLPGSLGGIGISPTTTNSTVGSIGSGSIT
VGGPTSSTGGLLGPAPGLTSVGSGILGLSSVQSGVQVSSLVSLSPVGGLAPGSGVGVIGS
NGGSSGSGGSGVVGGSSSLSIRPPSQQKQNGSTSYSAVVADSTTDSALTSASQSQSSQPS
SLTSTANQPKDTGPSLLGSLSLSSSSPSPAFYSEAKTVSGGSLLNGPLSYSQSSDSIKPQ
EPLSSLKSMAERAALSSGMEGDMPSLHLTPDIFPSSTTAPSGPPSAPQPSQSEVSIPPSL
GVCPLGPVPLSKDQLYQQAMEEAAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHS
DTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITD
EFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaaggggaaatagatcgatgtctgaaaaaagtagcggag
ggagtggaacagtttgaagatatctggcaaaagcttcacaatgcagccaatgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctacagcgtcttcgagac
cagatcaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctagtagagaac
cgcaaactcatagaaacgcaaatggagcggttcaaaatagtggagagagaaaccaagacg
aaagcgtactcgaaagaagggttgggtctggcccaaaaggtggacccggcccagaaggaa
aaggaggaggtcggcacgtggctaacgaatacgatagacacattgaacatgcaggtggac
cagtttgagagcgaagtggagtctctttcagtccagacgagaaaaaagaaaggagacaag
gagaagcaggatcggattgaggagctgaagaagttcattgagaaacatcggcaccacatc
cggatgctggagaccatactgaggatgctggacaatgactcagtgcaggtggacgccatc
aggaagatcaaggatgatgtggagtattatctagactcgtcacaggatccagactttgag
gagaatgagtttctgtacgacgacctggacctggaagacatccctcagacactagtcgcc
acctccccgccgggacactcacacatggaggatgagattttccagcactccagcagcaca
cccacctccaccacctcatcttcacccatccctccctcgcctgccacttgcactacggag
aattcggaagatgacaaaaagaggggacgctcaacagacagtgaagtcagtcagtcacct
gtgaagaacggaaacccctcttcctcattatcctcttcctcttcctcctcctcttcctcc
tcctcctcctcttcctcctcttcttcttcctccgtctcgggactgacctcatcctcactt
gtctctatggcgaccatcgcggcaggagggctcagcagctctgggggcaacagtcatcac
ggcagctcggggggtctcctctccaacacttccgctggcagctacagcaatgccacccag
cagcagccgcacccgtcagcacagcaacaacaggccaaaaacttagttagctccacctcc
tcaactccaatctctatccccatcacctccaccaacagccatctggtctcttctgccccc
tctccacccaacgccatcacacaggggctcttcacttcaacttcccagccccagtctctc
tctgggcacacaccaacctccaacagtcttggcctcagtctgggcctctcgctggggaaa
ggcggcatgtccagctcgatcaccaccagcccaatgtccgggagccttggcttgtcaggg
atgccggcatccctgagcaccatggcgagccttctgtcgggctccaccccggcaccctac
gctcaggcagctgcctcaggagcaatcggctctggcctgcctggctctcttggcggcatt
ggcatcagccccacgacaaccaacagcacagtgggctccatcggcagcggaagcatcaca
gtcggcgggccgacatcctcaacaggaggtctgctgggcccagctccagggctgaccagt
gtcggctcagggattctgggtctgagttccgttcagtcaggggtgcaggtgtcttccttg
gtgtcactgagcccagtaggaggtttagcgccgggtagcggagtgggagtcatcgggagc
aacggaggcagctcgggatcaggggggagcggagtggtgggaggaagctcgtcactctcc
atcaggccgccaagccaacagaagcagaacggtagcactagttacagcgctgtggtagca
gacagcacaacagactccgccctcaccagtgccagccaatcacaaagcagccaaccctca
tctttgacctctacagccaatcagcctaaggacactggtcccagtttactgggctcacta
agtttgtcatccagctccccgtcgccagccttctacagcgaggccaaaacggtgagcggc
ggcagccttctgaacgggccactgtcctactcacagtcctccgacagcatcaagccccaa
gagcctctgagcagcctgaagtccatggccgagcgagcagcactcagctcagggatggag
ggagacatgccctctctgcacctcaccccagacatctttcccagcagcactacggccccc
tcaggccccccgtcagcacctcagccctcgcagtcagaggtcagcatccccccatcgttg
ggggtctgcccgctggggccggttcccctgtccaaagaccagctctaccaacaggccatg
gaggaggcagcgtggacgcacatgccccacccgtccgactccgagaggatcaggcagtac
ctgatgaggaacccgtgccccaccctgcctttccaccaccaggtgccaccgccccactct
gacactgtagagttttaccagaggctttccacagaaactctcttcttcatcttttactac
ctggagggcactaaggcccagtatctggcagccaaagccctgaagaagcagtcatggagg
ttccatacaaagtacatgatgtggtttcagaggcacgaagaacccaagaccattacagat
gagtttgagcagggaacatacatttactttgactatgagaaatggggccagcggaagaag
gaaggcttcacgtttgagtaccggtacctagaagaccgagacctccagtga
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