Epinephelus fuscoguttatus (brown-marbled grouper): 125905112
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Entry
125905112 CDS
T08419
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
efo01009
]
125905112 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125905112 (sfpq)
03041 Spliceosome [BR:
efo03041
]
125905112 (sfpq)
Protein phosphatases and associated proteins [BR:
efo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125905112 (sfpq)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125905112 (sfpq)
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125905112 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
125905112
NCBI-ProteinID:
XP_049458934
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All DBs
Position
LG17:complement(13649101..13674719)
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AA seq
643 aa
AA seq
DB search
MSRFTNNRGGLGMNFQQRRGGGPGGPMRGGLMGNPHFRSHPFQNQNQNQNRRGGNNNFNR
APNQGPQTPQKPPQNQGIIPPPSPGPALTMKGPAQQQQQQQQQQQQPAQQQQKPTTPAPQ
PKIQSPPPKPNVSTPPPNQANKNQNQQLKSPAGNANGQQQKQPPHPSPKSGPQLGQKTGP
HQGQKSGPHQGQKTGPHQGQRTGPSPARPRQEPEKNSDAAPSDAAPSKEFKATLSMLLKP
GEKTYTQRCRLFIGNLPNDITEEDFKRLFAKYGEPSEVFINKNKGFGFIRLESRALAEIA
KAELDDTPTKGRPLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGMVERAIVIVDDRG
RPTGKGIVEFASKPAARKALDRCNEGVFLLTTSPRPVVVEPLEQFDDEDGLPEKLAQKNP
RYQAEREEPPRFARPGSFEYEYSKRWKSLDDMEKQQRQQVEKNMREAREKLESEMEDAYH
EHQANLLRQDLLRRQEELRRMEELHSQEMQKRKEMQLRQEEERRRREEEMLRKREMEEQM
RRQREESYRMGNFMDREREMRMSSSGTLGMSDMSFGGSNQKFPMGGLSFEGQQGMGSASG
SLMGKEMRNERFAQGGPRGMGPGSAGYGRVREEFDGPAKKPRF
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatttaccaataatcgcggcggccttgggatgaatttccagcaacgtagaggc
ggtgggcccggcggcccgatgcggggtgggttaatgggaaatccacatttcaggagccat
cctttccagaatcagaaccaaaaccaaaaccggaggggaggaaataataacttcaacaga
gcgccgaatcagggaccacagaccccccagaagccaccgcagaaccagggaattatccct
ccgccaagtcctggcccggctctcaccatgaaaggcccggcacagcagcagcagcaacaa
cagcaacagcagcaacaaccggcacagcaacagcagaaaccaacaacccctgcgcctcag
ccgaagattcagtcgcccccgccgaaacctaacgtgagcacacctcctcctaaccaggca
aacaagaaccagaaccagcagctgaagtcaccggcaggaaatgctaacggtcagcagcag
aagcagcccccacacccgagcccgaagtcgggcccccaactcggccagaagacaggcccc
caccaaggccagaagtcaggtccccaccaaggccagaagacgggccctcaccaaggccag
aggacagggccatcaccagcaaggcctagacaggagccagagaaaaacagcgacgcagcc
ccgtcagatgcagccccatcaaaggagtttaaggcaacgttgtccatgctgctgaaaccc
ggtgagaagacatacacccagcgatgccgcctgttcattggaaatctgcccaacgacatt
acagaggaagatttcaagagactgttcgctaaatatggagagcccagcgaggtcttcatc
aacaaaaacaaaggctttggtttcatccgattggagtcccgtgcacttgcagagatcgca
aaagcagagttggatgacacaccaacaaaaggcagacccctgcgtgtcagatttgccaca
cactctgcagctttgtctgtgaagaatctgtcaccatttgtttcaaacgagctcctggaa
gaagctttctcgcagtttggaatggttgagagggccattgtcattgtggatgatcgcggg
cgccccacaggcaagggcattgtcgaatttgcctccaaacctgcagctagaaaagccctg
gatcggtgcaatgaaggtgtcttcttgctcaccacatcaccccggcctgtcgttgtcgag
cctctggagcagtttgatgatgaagatggtcttccagagaaactggcacagaagaacccc
agatatcaagcagagcgcgaggaacctccccgttttgcccgccctggctcttttgaatat
gagtattctaaacgctggaagtctctggatgacatggagaagcagcagaggcagcaggtg
gagaagaacatgcgcgaggcccgtgagaagctggagagtgagatggaggatgcgtaccat
gagcaccaggccaacctgctcagacaagatctgctcaggcgacaggaggaactgcggcgc
atggaggagttgcacagtcaggagatgcagaagaggaaggagatgcagctcagacaagaa
gaagagcgccgccggcgggaagaagagatgctacgcaagagggagatggaagagcagatg
cgccgccagcgtgaggagagctacaggatgggcaacttcatggatagggagagggaaatg
agaatgagttccagtggaactttgggcatgagtgatatgtcctttggtgggtccaaccag
aagttccccatgggtggactgagttttgagggccagcagggaatgggatccgcttcaggc
agcctgatgggcaaagaaatgcgcaatgagcgctttgcccagggtggtcccaggggaatg
ggtcctggtagtgctgggtacggcagggtccgtgaggagtttgatggccctgctaagaaa
ccccgtttttaa
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integrated database retrieval system
