Epinephelus fuscoguttatus (brown-marbled grouper): 125905243
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Entry
125905243 CDS
T08419
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125905243 (prdm1b)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125905243 (prdm1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
STL11_N
zf-C2H2_jaz
B129_C2H2-zf
CSAG
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125905243
NCBI-ProteinID:
XP_049459100
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Position
LG17:16734482..16746542
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AA seq
709 aa
AA seq
DB search
MKLESDMSGWREVDFVLNCTYIVPDQVSDPSFNLPKAMTSIPRNLTFEYGADNEVMGVFS
KEYIPQGTRFGPLQGVIYTKDNVPKQANRKYFWRIYSSGQLQNFIDGYDVQRSNWMRYVN
PARSLAEQNLVACQNGRDIYFYTIRPVEPSQELLVWYSQEFAQRLCGQQVDSKQKYLNSD
EESEYIKQHLPQQTWLTERTKQEMKEESDEDGEEKIDVEVLERDTPPDTPDDQIMDFSKK
VEKEENDRDQEDQGIIPSPQPEHREPTLGLNHSYLPEHHPALSSQHRNLPLHLHGLYREG
VSSYPLYPQPRPLQPNYQLLPPYNPHYPRLLLPSYSPPFPGMLPSRGALRYSSYLGTDGL
PYPPIGPPNLLPVSLPYPPSSQGGLKELKPNVSPPRGAPATPELSPLPKPDSQHQSTEQS
PSGCEEAMNLSLATIKSNTATRNGPGHKSLPYPLQKQNGKIKYECNICSKTFGQLSNLKV
HLRVHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGEKPHECQVCHKRFSSTSNLKTHQRL
HSGEKPYQCKLCSTKFTQYIHLKLHRRLHSSRDRPHRCHLCSQAFFHRFSLRIHQCSCCL
ANAPVNVHMKQMVERFDASQEADMLTEAASAAQVEEAVECWLARTLEGEGKEDQKEATVL
LKALTVAINTPAMPSAQSATSHHSPHLAYQERASVVHLHQRPAVKTEGQ
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagaaagcgacatgagcgggtggagggaggtggactttgtcctcaactgcacc
tacattgttccggaccaggtgtcggaccccagcttcaacctgcccaaagccatgacctcc
atcccacgcaacctcaccttcgaatacggcgcggacaatgaggtgatgggtgtgttcagc
aaagaatacattcctcaggggactcgcttcggccctctgcaaggagtcatctacaccaaa
gataatgtcccaaaacaggccaacaggaaatacttctggaggatttatagtagcgggcag
cttcaaaacttcattgatggctatgacgtccagagaagcaactggatgcgctacgtcaat
ccagcccgctctctggccgaacagaacctggtggcatgccagaatggccgggacatctac
ttctacaccatccgaccagtggagcccagtcaggagctgctggtgtggtacagccaggag
tttgcccagaggctctgcggccagcaggtcgacagcaaacaaaaatatttaaattctgat
gaagagtcggaatacatcaaacagcacctacctcagcagacgtggcttacagagcgaaca
aagcaggagatgaaagaagagagtgatgaagacggagaggagaagattgatgtggaggtg
ctggaaagagacactccacctgacacgcctgacgaccagatcatggatttcagcaaaaaa
gttgaaaaggaggagaacgacagagatcaagaagaccaggggatcattccttctcctcag
ccagagcacagagagcccaccctgggcttaaatcactcgtatttaccagaacaccatcct
gcactctcatctcagcacagaaatctccctcttcacctccacggcctgtacagggaaggc
gtttcctcttaccccctttacccccagcccagacccctccagcccaattaccagctcctt
cccccctacaacccacactatcctcgcctcctcctaccctcctactcccctcccttccct
ggcatgctgccctcaagaggagccctccgatacagcagctatctgggcacagacggactc
ccatatccacccattggcccacctaacctgctgccagtgtccctcccttaccctccatct
tcacagggaggtctgaaagaactaaagccaaatgtgtcgccaccacgaggcgccccagcc
accccagagctctcccccctccccaagcctgacagtcaacatcagtcgactgagcagtcg
ccctccggttgcgaggaagccatgaatctgagcctggctacgatcaaaagcaacacagca
acacgcaatggccccggccacaaatccctgccctacccactgcagaagcagaatgggaag
atcaagtatgaatgtaatatctgctcaaagactttcggacagctgtcaaacctcaaggtc
catctccgagtgcacagtggtgagaggccgttccagtgtaacctatgtaaaaagagcttc
actcagctggctcacctccagaaacatcacctggtccacacaggagagaagccgcatgaa
tgtcaggtgtgtcacaaacgcttcagcagcaccagcaacttgaagacacaccaacgcctc
cactcgggggagaaaccttaccagtgcaagctgtgcagcaccaagttcacccagtacatc
cacctcaaattgcaccgccgcctccacagcagccgtgacaggccccaccgctgccatctc
tgctcccaggccttcttccaccgcttctctctccgcatccaccaatgcagctgctgcctg
gccaacgctccggtcaacgtgcacatgaaacagatggtggagcggttcgacgccagccag
gaggctgacatgctcacagaggctgcgtcagcagcgcaggtggaggaagcggtggagtgc
tggttggctcgtaccttagagggcgaggggaaggaggaccagaaggaggccactgtactg
ctgaaggctctgacagtggcgattaacacaccggcgatgccctcagcccaatcagctaca
tcacaccacagccctcacctggcctatcaggagagggccagcgttgttcatctccaccaa
cggccagcagtgaagacagagggacagtga
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