Epinephelus fuscoguttatus (brown-marbled grouper): 125905604
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Entry
125905604 CDS
T08419
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efo03000
]
125905604 (rc3h2)
04121 Ubiquitin system [BR:
efo04121
]
125905604 (rc3h2)
Transcription factors [BR:
efo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
125905604 (rc3h2)
Ubiquitin system [BR:
efo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125905604 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
Prok-RING_4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
125905604
NCBI-ProteinID:
XP_049459642
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All DBs
Position
LG18:21276906..21311665
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AA seq
1154 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLNSAAEVENYEVCRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDAPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVGRAFPLAPGVMGKTFTMEGSIHTDVSG
GMGQGLKGTGENTASLTEGVPGLSHPELIPRGADMMEEMKRAVPNGSNGSNGLSNRSSSG
STEQKPISPPRTPVSHSSASSPLTTIGRGDGGAPIPKHGQFVLRAPHPSQASELYFQEPH
SAYDTAHYQPTSGSYYQSTLHPSHKPCMARFLRSSNVPESSLPPSIGPPPSSYPSDPQAP
HPPSSSSSGYPPHPPRDRMGPPAFHPHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQLYHR
EDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYEDLFRR
KQEQWAHHHHHHNANRPSQSSPIFTIDFGTEHVESSGGQCVGCRFRGEESLAHYSPWSCG
TIGPCLSPFEPETLTHTSAHSCSEHSVRLFTHSQELDSNGGGSGGVSGSGVGKRWLHSLD
HYRRLKDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPIQATACQGSANTTPINFKDYN
HHLDHSDYRWSSRGSDSSSHSSFLESEQLCASELHGRRTSLSSGEKIVSDLQARQAAYSR
DRGHVDSEPDPDRDIELELCALDMEDSDHQEIKSQESLDLATPQSQDASHLLPPPCSSPL
LASPVEEHSQTEGPSSEKMDAHLLKKMAFRKSLSPGGLVSGGLAVGKLVLRTGPPRLGDA
RPDTPGTEMLLNGS
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcagcccagtggacagagttcctgtcctgtcccatctgctacaatgag
ttcgacagcagcggccaccagcccatcagcctgggctgctcccacacggtgtgtaagacc
tgcctgcacaaactgcaccgcaaggcctgccccttcgatcagacgccaatcagcaccgat
atcgacctgctgccggtcaactgcgccctgctgcagctggtcggcgctcaggtccctgat
gtgcagccggtgagcctcaacagtgcagcagaagtcgagaactatgaggtgtgcagggtg
tgcgtggaagagctggctctctacctaaaaccaatcagcggagcaaaaggcgtggcgaca
ctgagtccgagtgtcctcagtcggccaatgcagaggaagctagtgaccttggtgaactgc
cagctggtggaggaggagggccgtgtccgggcggtgcgggcaggccgctcgctgggggaa
cgaaccgtaaccgagctcattctgcagcaccagaacccccagcagctctctgccaacctt
tgggcagcggtgagggcgcggggatgccagttcctgggacctgctatgcaagaagatgca
ctgaagctagtcttactggctctggaggatggctcagctttgtccaggaaggtgttggtt
ttgtttgtagtccagaagctcgaggcccgcttcccccaggcctccaaaaccagcataggc
cacgtggtgcagctgctctacagggcctcctgcttcaaggtgactaagcgtgatgaagac
tcgtcactgatgcagctaaaagaagagtttcggacatacgaagctctccggagagaacat
gatgctcagattgtccacatcgccatggaggcgggcctacgaatttcacctgagcagtgg
tcttccctgctgtatggagacctggtccacaagtcacatatgcagtccattattgacaag
ctgcagtctccagagtcatttgcaaagagtgttcaggagctgaccattgttctgcagagg
accggagaccctgccaacctcacaagccttagaccacacctagagctactcgccaacata
gaccacaacccagatgccccggcgccatcatgggaggagctggagagtgtgatgctggct
gtgaagttggtggttcatggactagtggagttcatacagaacttcagcaagaagagccac
gacgctccgcagcctcaggccaacagcaagtacaagaccagcatgtgccgagacctccgt
cagcagggaggctgtccccgaggaaccaactgtacatttgcgcacacgcaggacgagctg
gagaaatttagactaaggaacaagaagagcagcagcgtgggccgtgcgttcccgttagcg
ccgggagttatgggtaaaaccttcactatggagggcagcatccacacagatgtgtctgga
ggaatggggcaggggctcaaaggcacgggggagaacacagcctccttgacagagggagtg
cccggcctgtctcacccagagctgatccccagaggcgctgacatgatggaggagatgaag
agagcggtgccaaatggatccaatgggtccaacgggctgtctaacaggagctcgtcaggg
tcgacagaacagaagcccatctcacctcctaggactccagtcagtcactcctcagcgtcg
tctcccttgacaacaattgggcggggtgacggtggcgctcctatccccaaacatggtcag
ttcgtgctgcgtgcaccacatccttctcaggcgtcagagctgtactttcaggagccgcac
tctgcatatgacacggcccattatcaaccaacctcaggttcctactaccaatctactctc
catccctctcacaaaccctgcatggctcgcttccttcgatcctccaacgtcccagaatcc
tctctgccgccctcaattggccctccgccatcttcctaccccagtgaccctcaggcaccg
cacccaccttcctcctcttcctcggggtacccgccacacccacctagagatcgaatgggg
cctcctgccttccatccccacccggggcagcctcagtatgggcctctggctccggctcat
ggtgtttatgctcccctctatgacagcaggagagtatggaggcctcagctgtaccacaga
gaggatgccaggagcaactcactgcctccagaggtgctgcattcctccgtctaccagcct
ccactcagggagagattcaactctctagacagcaactactgctctggagctgaacaccgt
gcagggctacacagggattacggccgtgttcctctaggctatgaggatctgttcagaagg
aagcaggagcagtgggctcatcatcaccaccatcacaacgccaacaggccctcccagtcc
tcccccatcttcaccatcgattttggaaccgagcatgtggagagcagcggaggccagtgt
gtggggtgcaggttcagaggcgaggaaagcttagcacactactctccgtggtcctgtggc
accatcggcccctgcctcagcccctttgagcccgaaacgctcacgcacacctcggctcac
tcctgctcagagcactcggtgagactcttcacacactcacaagagctggacagtaacgga
ggtgggagcggaggcgtaagcggtagtggtgtcgggaagcgatggctgcattcattagat
cactaccggcgcttaaaagatgaggatccgatcattccctttagcgaggggcccattatc
tccaagtggggcgccatatccagggcatctcgcacaggctaccacaccaccgaccctatc
caagctacagcctgccagggcagcgccaacaccacacccatcaactttaaagattacaac
caccacttggatcacagtgactacagatggagctccagaggatcagactcttccagccac
tccagtttcctagagagtgagcagctttgtgcatcagagcttcatggtcgtcgcacatca
ctaagcagtggagagaaaattgtgtctgatctgcaagcccgtcaggccgcctacagccgg
gatcgaggccatgtcgacagtgaaccagacccagatcgagacattgagctggaactgtgc
gctcttgacatggaagattcagaccatcaggagatcaagtctcaggagtctttagacctg
gccaccccacagtctcaggatgcttcccacctcctcccaccaccctgctcttctcccctc
cttgcttctcccgtggaggagcactcccaaacagagggtccttcgtcagaaaagatggat
gctcacctgctgaaaaagatggccttcaggaagtctctgtctcctggagggttggtctca
ggaggcctggccgtcggcaagcttgtcctgcggactggacctcctcgcctgggggatgct
cgtcctgacacgcccgggacagagatgctgctcaatggaagctaa
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