Epinephelus fuscoguttatus (brown-marbled grouper): 125905625
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Entry
125905625 CDS
T08419
Symbol
pdlim5b
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125905625 (pdlim5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
efo04990
]
125905625 (pdlim5b)
Domain-containing proteins not elsewhere classified [BR:
efo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125905625 (pdlim5b)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
125905625
NCBI-ProteinID:
XP_049459689
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Position
LG18:complement(19027748..19078683)
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AA seq
609 aa
AA seq
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MTSSYNVSLTGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKAKISVGDIILSIDGISTD
GMNHLEAQNKIKACAGNLSLTMQRPSAPKDGVPKDEPQEIIKPVPITHPAPSTAYTKPSS
QPSAAYNKTARPFGGDSSVVTASSPAPPSIPSQSSAFKPAAPSQPPQPPFQLKSSVPASD
SAPANSVPRPSPGRSAFTSPSASSSSSNSSSPARVTATSSNPNVPQPSVYNTPINLYSNT
NACEVAMGQRRGLLESQGLSEHLNGKPNVEAENHASPLSEASKKRLIEDTEDWHPRGSTS
QSRTFNILAQLTGTENDQTPENSGKNEAVDKATPAVHTSPAAKTFTKSAASPRNGNVAPA
PAFKSPAAQNKPSFPPGGRTGFAKGGAAPAFGKVTNTAPRGPDRPTPQPHPEDLNSLVQR
AEHIPAGTRTPMCNKCNKVIRGPFLVAMGMSWHPEEFNCAHCHSSLAVGGFVEEKGQVYC
ERCYEQFFAPTCGRCNQKILGEIMNALKQTWHVSCFVCVACQQPIRGNTFHMEDGQPYCE
KDYYNLFGACCHGCDFPIEAGDKFLDALGFTWHDTCFVCAVCQANLEGQAFFSKKDKPLC
KKHAHTVNI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagctacaatgtctccctgactggccctgccccctggggcttcagactgcaa
ggagggaaggacttctgcctgcccctcaccatctcacggctcactgatggaggcaaggca
gccaaagccaagattagtgttggagacatcattctgtccattgacggcatctccacagac
ggcatgaatcacctcgaggcccagaacaagataaaggcctgcgcaggcaatctcagcctc
actatgcaaagacccagtgcccctaaagatggagtacctaaggatgaacctcaagaaatc
attaagcctgtcccaatcactcaccctgccccaagcacggcatacaccaagccatcaagt
cagcccagcgctgcatacaacaagacagccaggccgtttgggggggacagcagtgtggtc
acagcttcctccccagctcccccctccattccttcacagtcatccgctttcaagccagct
gccccttctcaaccgccacagcctccatttcagctgaagtcaagtgtccctgcctcggac
tcagctccagccaattcagttcccaggcccagccctggtcgctccgccttcacctccccg
tctgcctcttcctcctcatctaactcctcctctccagccagagtgacagccacctcctcc
aatcctaatgtcccacagccctccgtctataacacacctatcaacctctactccaatacc
aatgcctgtgaggtggccatgggacagaggcgaggtcttttggagagccaagggctgtca
gagcacttaaatgggaaacctaacgtggaggccgagaatcacgcgtccccactgagtgaa
gccagcaagaagcgtctgattgaggacacggaggactggcacccgcggggtagcacctcc
cagtcccgcactttcaatatcctggcccagctcaccggtactgaaaatgaccaaactcca
gagaacagtggaaagaatgaggcagtggacaaagccactcctgctgttcacacctcgcct
gcagcaaaaacatttaccaaatctgcagcatcacccaggaatggcaacgtggcccctgcc
ccagcgttcaagagcccagcggcccagaacaagccttccttcccacctggaggtcgaaca
ggttttgcaaagggtggagcagctcctgcgtttggcaaagttaccaacactgctcccaga
ggtccagaccgccccacccctcagccacatccagaggacctcaactcgctggtgcagcgg
gctgagcacatcccagctgggacacgcaccccaatgtgcaacaagtgcaacaaagtcatc
aggggcccattcctcgtggccatgggcatgtcgtggcaccccgaggaattcaactgtgct
cactgccactcctccctggcagttggtggatttgtggaggagaagggccaggtgtactgc
gaacgttgctatgagcagttctttgctcccacctgtggccgctgcaaccagaagatcctg
ggggaaatcatgaacgccctaaaacagacctggcacgtgtcctgcttcgtctgtgtcgcc
tgccagcagccgatcagaggcaacacgtttcacatggaggacggacagccgtactgtgaa
aaagactactacaacctgtttggggcctgctgccacggctgtgacttccccatcgaggcg
ggggataagttcttggatgctctaggattcacctggcatgacacctgctttgtgtgtgcg
gtctgccaggctaatctggaaggtcaggcgttcttctccaaaaaagacaagcctctgtgc
aagaaacatgcccacactgtcaacatctga
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