Epinephelus fuscoguttatus (brown-marbled grouper): 125905749
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Entry
125905749 CDS
T08419
Symbol
dcc
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125905749 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125905749 (dcc)
Cell adhesion molecules [BR:
efo04515
]
Immunoglobulin superfamily
DCC/UNC5 family
125905749 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_Rha78A_N
V-set
Fn3_VIN3
fn3_SORL1
Interfer-bind
C2-set_2
C2-set_3
Ig_5
Ig_4
Protocadherin
EphA2_TM
V-set_CD47
Fn3_SaeA_3rd
Sp38
Ig_PDGFR_d4
Arylsulfotran_N
FAM176
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
125905749
NCBI-ProteinID:
XP_049459893
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All DBs
Position
LG18:6728759..7126742
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AA seq
1500 aa
AA seq
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MEHGCIGDVWEVLVRRRRRTGRFYLLLLCWLLAALTTAHASDASSTSSSSSSPSLGGFVD
FTFTVEPQDTVTVRGGVLQLDCQAQSDAVVGPPTIIWRKDDVLLSTVVDERRQQLANGSL
LVQNVVHSRHHRPDEGEYQCLATLDGLGSIVSRTARVTVAGPLKVVVPTESVSSYLGDTA
LLRCEVSGDPTPVIRWQKNREDLPLMFDPDSRLAVLPSGSLQVSRVQPPDSATYRCLADN
PGSTRTGTDAELRVLPEPGVSRNLQFLQRPSRASVLLGTDAVLECAASGYPTPSIQWRRG
EELIQSWNKKYSLLVGSNLIIRSVTDDDSGSYSCTATNKNHNITAHTELSVLVPPQFLNY
PTNTYAYESTDIELECAVTGNPPPTVRWMKNGEEVIPSDYFQIVDGSNLQILGLVKSDEG
FYQCVAENSAGSSQAMAQLLLREPVSPSPGVALPSAPRDLVPVLVSSRFVRLSWRPPEET
GGAVQTYGIYYSQDGVERERSVNVSEPESLELTVSNLKPEESYSFRVIAYNDVGPGESSA
PLRITTKPDLQVPSRVESLQAEALSPTSVQVSWEPPSQPNGPILGYRLLWTESPSGKEQS
VEVSGLNYKMEGLNKFTEYTVRVLAINRYGPGTAPETISVTTQSDVPSAPPQNITLEVVL
SRSIKVSWQPPPRSTQNGLISAYKIKYRKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQ
VAAMTANGTGPASDWYTAETPENDLDESQVPDQPSSLHVRPLPNSIIMSWTPPLSPNILV
RGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGVPLYESAVTR
SLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVALSSDSVRVSWADNSMTKNQ
KASEVRYYSVKWKTSYSTSGKYKSADTTALSHTVTGLKPNTMYEFAVMVTKGRKSSTWSM
TAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANGRITGYILYYTLDKNMPID
DWVMEAITGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSEPVHFRTAKVEHPDKMAND
QGRGGDHAYWPSDTNLIDRSSINESPIGQMRPPHGSATPQKNSNLLVIIVVSVGAVTVVV
VVIVALICTRRSSAQQRKKRASHSASKRKGSQKDLRPPDLWIHHEEMEMKNMEKAPSVAP
TGRDSPIQSCQDLPQVAHSQSESQMGSKSSHSGADGDEASSSISTLERSMAARRGTRGKM
MIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCGFTHNKFSLRPMPFPSLTVDRGYT
PAMPSDASTNPLLQQQPPPQQAPPLLPGSSAPPGEHVPGVGPIPGAPAAAAAEEAQAGSG
RTIPTACVRPTHPLRSFTNPLLPPPMGTIDPKVYTSMMPQSSASLPKPQVKTASLGQAGK
ARSPLLPVSVPTAPDLPEEGGTKPAEDSAASVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atggagcatggatgtattggtgatgtttgggaggtgctggtgcggaggaggaggaggaca
ggaagattctacctgctgctgctctgctggctgctggctgctctcaccacagcgcacgcc
tcagatgcctcctcaacttcctcctcctcctcatcacctagtctcggaggttttgtggac
ttcactttcactgtggagcctcaggacacggttacggtccgaggtggcgtattgcagctc
gactgccaggcgcagtctgatgcagtggtgggacctcccaccatcatatggcgtaaggac
gatgtgctgctgagcacggtggtggacgagcggcggcagcagctggctaatggctcgttg
ctggtgcagaatgttgtgcactcgcggcaccatcgacctgatgagggtgaataccagtgc
ctcgctacactggacggactggggagtatcgttagccggactgccagggtcactgtggcg
ggtccactgaaggtggtcgtccccaccgagtccgtctcctcatacctcggcgataccgcc
ctgttgcgctgtgaggtatcgggtgacccgacgcctgtcatccgctggcagaagaaccgg
gaggacctgccgctgatgtttgaccccgattcacgcctagcggtactgccatccggctcg
ctgcaggtcagtcgcgtccagccgccagactcagccacgtaccgctgtctggctgacaac
cccggcagcaccaggacgggaacggatgccgagctccgagtgctcccagagcctggggtg
agcaggaacctgcagttcctccagcgtccatccagagcatcggtcctgctgggaactgac
gccgtgctggaatgtgctgcttcgggatacccaacaccgagcatccagtggagaagagga
gaggaacttatccagagctggaataagaagtactctctgctggtgggcagtaatctgatc
atcaggagtgtcactgacgacgactctggcagttacagctgtacagccaccaacaagaac
cataacatcactgcacacacagagctgagtgtactggtgcctcctcagttcctgaactac
ccgaccaacacgtacgcctacgagtccacagacattgagctggagtgtgctgtgacagga
aacccaccgccaactgtccgctggatgaagaacggggaggaagtcatccctagcgactac
ttccagatagtggatggcagtaacctgcagattttgggtttggtgaagtcggatgaagga
ttttatcagtgtgtagctgaaaactcagctggcagctcgcaggcgatggctcagctgctg
ctccgagagccagtgtcccccagcccaggcgttgccctcccctctgccccccgcgacctg
gtccctgtcctagtgtccagccgttttgtccgactcagctggcgccccccagaggagact
ggaggagccgtgcagacctatggtatttattattcccaggacggagtcgagagggagcgg
tcagtgaatgtgtcggagccagagtctctggagttgactgtgtccaatctgaaaccagag
gagagctacagtttcagagtcattgcttacaacgacgtgggcccaggagagagctccgcc
cccttgaggatcaccaccaagcctgacctccaggttcccagcagggtggagtctctccaa
gctgaggctctgtctcccacctccgtccaggtgagctgggagcctcccagccaaccaaac
ggccccatcctgggctacagactgctgtggaccgagagcccgtcgggcaaggaacagagt
gtggaggtgagcggactcaactacaagatggagggactcaataaattcacagagtacaca
gttcgagttttggcaatcaaccgctacggaccaggcactgcgccagaaaccatcagcgtc
accacccaatcagacgtacccagcgctcctccccaaaacatcactttagaggtcgtccta
tccaggagcatcaaggtgtcatggcagccacctccgcgcagcacccagaatggcctcatc
tctgcctacaagatcaaatacaggaagaccggtcgccggggagaccaagaggcaatcgaa
cccaacaacttctggtacctgttcacaggtctagagaagggcagtcagtacagtttccag
gtagcagctatgacggccaatggaacaggtccggccagcgactggtacactgctgagacg
ccagagaatgacttggatgagagtcaggtgcccgaccagcccagctctctgcacgtcagg
ccactgcccaacagcatcatcatgtcctggactccgccgctcagcccaaacatcctagtt
cgaggctacatcatcggctacggagtggggagtccctatgccgagacggtccgagtggac
agcaagcagagatactactccatcgaaaaccttgagccgagctcgcactacgtgatttcc
ctgaaggcgttcaataacgcaggagagggagtccctctgtatgagagcgctgtcactcga
tctctgacagaccccattgacccatctgaggatgacctcttccacctctttgataaatac
cccactcccatgccagacaccagcactcccatgatccccccggtaggggtccaagccgtg
gctctgtcctcggactcagtccgcgtctcctgggccgacaactccatgaccaagaaccag
aaggcgtctgaggtccggtactactccgtcaaatggaagaccagctactccaccagtggc
aagtacaagtctgcagacaccacagcgctcagccacactgtcaccggcctcaaaccaaac
accatgtatgagtttgctgtcatggtaaccaaaggtcgcaagtccagcacctggagtatg
acggcacacgccacaacatatgaagcagctcctagctccgctcctaaagatttgacagtt
atcagtcgtgagggacgaccccgcgccatcttaatcagttggcaaccaccaatggaggct
aacggacgaatcacaggttacatcctgtactatacgctggataagaacatgccaatagat
gattgggtgatggaggcgattacaggtgaccggctgacccatcaggttgtggatctgaac
ctcgacacggtttattacttcaggatccaggccaagaacgccaaaggggtcggcccactg
tctgagcccgtccacttcaggactgccaaagtggaacatccagacaagatggccaatgat
caaggtcgaggaggagaccatgcctactggccgtctgacaccaatctaattgacaggagc
agcattaatgagtctcccattggtcagatgcgtccacctcatggcagcgccacgcctcaa
aagaatagtaacctcctggtcatcatcgtggtttcggtgggagctgtcaccgtggtcgtg
gtcgtcattgtggcgctcatttgcacccggcgctcctccgcccagcagaggaagaagaga
gctagccacagcgccagtaagaggaagggcagccagaaggatttgcgacctcctgacctt
tggatccatcacgaggagatggagatgaagaacatggagaaagctcccagcgtcgctccg
actggacgcgattcgcccatccagtcctgccaggaccttccccaggttgcacacagccaa
tcagagagccagatgggcagcaagagcagccactcaggggcagacggtgacgaggcgtcc
agcagtatctctactctggaacgttcaatggctgccaggagggggacacgaggcaaaatg
atgatacctatggactcacagccgagcaacacaccggtggttagtgccatcccggtgcca
gctctcgactcttctcagtatcctggtatcctgccttcaccttcctgcggcttcactcac
aacaagttcagcctgaggccgatgcctttcccaagtctgacagtggacagaggatacaca
ccagcgatgccttcagatgcctccaccaaccctctcctccagcagcagcctccgccccag
caggcccctccgctccttcccggttcctctgccccacctggggagcatgttcccggtgtt
ggcccgatcccaggagcccctgctgctgccgccgctgaggaggcccaggctgggagtgga
cggaccatcccgacagcgtgcgtgcggcccacccaccctctacgaagcttcaccaaccca
ctgctgccaccgcctatggggaccatcgaccccaaagtgtacacctccatgatgccgcag
tccagtgcaagccttccgaagccccaggtaaagacggcctctctgggtcaggctggtaag
gctcgatcccctctgctgcctgtctcagtccccacagcgccagacttaccagaagaggga
ggaacaaaacccgcagaggattcagctgccagtgtttacgagcaggatgacctttcggag
cagatggcaagtctagaagggctgatgaagcagctcaacgccattactggttccgccttc
taa
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