Epinephelus fuscoguttatus (brown-marbled grouper): 125905784
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Entry
125905784 CDS
T08419
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125905784 (chd1)
03036 Chromosome and associated proteins [BR:
efo03036
]
125905784 (chd1)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
125905784 (chd1)
Chromosome and associated proteins [BR:
efo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
125905784 (chd1)
SLIK complex
125905784 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125905784
NCBI-ProteinID:
XP_049459939
LinkDB
All DBs
Position
LG18:complement(4276865..4331338)
Genome browser
AA seq
1800 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSPSDSDTEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQQR
QSSSNSGSDEDSSSSDGSDSSSGSKRRRNTGSSDSGSGSGSGSGSGSDSSAEDNSDETAS
DYEPSHKIKSRKPPTKMNFRNGKKSSTQKKKSQKCSSSEDEDDNYKKVASAGPRRQATVN
ISYKEDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSATTVYAVEA
DGDPNTNFSSNKEAGEIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKEQER
KKWLKAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYS
ECSWEDGALIARKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFVPMKKQPAYIGGDGLE
LRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFNEHQLYGPFLLVVPLS
TLTSWQREIHLWAPQMNVVVYLGDISSRNMIRTHEWMHIHSKRLKFNILLTTYEILLKDK
SFLGSVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFI
MPEKFHSWELFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSA
IQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFLNRADAL
QQLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLRSRQFLFQRLDGSIKG
EMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHR
IGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSAPF
NKEELSSILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFK
VANFSMMEDEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYLLPRMRNCAKQI
NFNASEGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKK
FGGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKNSGGRRGKVKG
PTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDS
SLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAK
KEAQKQTGTANSRKRKPRSKKSKTLKPTKTDEVLKSTSSDPPSDKRSDDEDEIEDEKEVT
PVKAPNRRSRTDRGVVKEEEDEDEEPEQEEVSSSGEREVKEKEIKKEGKKEKKEESWDSK
ETKEPKEKKETKPLEAVHKQEEIIEKNEVRTEVRERTKKASDVPVHITASGENVPVSEES
EELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYS
NPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNMRNINAHGYKHA
DIERLKDNSHQDESSRDSYSSDRHQSSGRLHESSSSSSKERHSSESHRKTTGGESRKRPY
SSFSNGKDHRDRDHYRPDSRDRDRQDRYYNDSKHRKLEEFRSSRDHRLDIKDHSHSDHRS
SYRYHSDWQTEQRASASGPRSPRDQRSPYDSRSPMGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagcgaggatgaaagtgtaagcaacagtagtggagaatcgagtaattct
gatgatgaatccggttctggatcaggctcggcatcagggtctgcctcaggctccagttcc
agctcctccagcagcagcagccagtcagggagcagcgactcaggtagtggctcagactct
ggcagcccatcagattctgacacagagaaatccaaggagaagatggagccgccaaataag
tcaaacatcgatggagctgagttctggaagtccaacccaagtatcctagcagtgcaaaga
tctgctatgctcaggaaacagcagcttcagcagcagcagcagcagcagcagcagcagaga
caaagctcgtccaatagtggatctgatgaggactcatcaagtagcgatggatctgactca
tcaagtggatccaaaaggagaagaaatacaggctcctctgactctggatcaggttctgga
tccgggagtggttctggatcagactcatctgcggaggacaacagtgatgaaaccgcgtcg
gactatgagccgagtcacaaaatcaaaagcagaaagcctccaaccaagatgaattttcga
aatgggaagaaaagcagtacccaaaagaagaaatcccagaagtgttcttcctctgaggat
gaggatgataactacaagaaggtggcatctgctgggccacggcggcaggccacagtcaac
atcagctacaaggaggacgaggagctaaaaactgattcagacgacctggtggaagttctg
ggtgaagatgtcccgcagcctgaggaagacgagtttgaaacactggagagagtgatggac
agcaggataggaaggaaaagagcaacaggaagtgcaaccactgtatacgctgtagaagca
gatggggacccaaataccaacttcagttctaacaaagaggctggtgagatccagtatttg
ataaagtggaagaactgggcacatatccacaacacctgggagacagaggagactctcaag
ttacagaatgttaagggcatgaagaaactggacaatttcaagaagaaggaacaggaaagg
aaaaaatggttaaaggcggcttcaccagaggatatagagtatttcaactgtcaggaagaa
ctgatggatgacctgcactcgcagtaccagcttgtagagagaatcatagggcattcaaac
cagaagtcagcggctggttacccagactacttgtgcaagtggcagggtttaccatactca
gagtgtagctgggaagatggtgctctgatcgctagaaagttccagaaatgtattgatgac
tacatgagcagaaaccagtccaagaccattccatccagagactgcaaggtactcaaacag
agacccaggtttgtgcccatgaagaagcagccagcttacataggaggtgatggactagag
ctccgagactaccagttggacagtttgaactggatggcccactcctggtgcaaaggcaac
agttgcatacttgctgatgagatgggtttagggaagaccatccagacaatctccttcctc
aactacctgtttaatgagcaccaactgtatggacccttcctgctggttgtgcctctctca
acactaacctcctggcagagagaaatccatctctgggcccctcagatgaatgttgtggtc
tacctaggagacatcagcagcaggaacatgatccggacacatgagtggatgcacatccat
agcaagagactgaaatttaacatccttctcacaacatatgagattctcctcaaagacaag
tcatttttgggcagcgttaactgggcattcattggtgtggatgaggctcaccgactgaag
aatgatgactccctcctctacaagaccatgattgacttcaagtcaaatcacaggcttctg
atcactggaacgccactgcagaactccctgaaagagctctggtccctgctgcacttcatt
atgcctgagaagtttcactcttgggagctgtttgaggaggagcatggtaaaggcagggat
tcgggctacaccagtctgcataaagagctggaaccttttttactgcgccgagtcaagaag
gatgtggagaaatctcttcctgccaaagtggagcagatcctcagagtggagatgagtgct
atccagaaacagtattacaaatggatcctgaccaggaactacaaggccctgagtaaaggt
accaaaggcagcacttcaggcttcctgaacatcatgatggagctgaagaagtgttgtaac
cactgttaccttatcaaacccccagaggacaacgagttcctcaacagagctgacgcctta
cagcaactgatccgcagcagtgggaagctggttctgttggacaaactgctggtgcgtttg
aaagagcgaggtcacagagttctcatcttctcccagatggtacggatgctggatatccta
gctgaatacctgaggagccgacagtttctctttcagagattagacggctccatcaaaggg
gagatgaggaagcaggcgttggatcattttaatgctgagggctcagaggatttttgcttt
ttgttatcaacgcgtgcgggtggtctgggaatcaatctggcatcagctgacacagtagtc
atctttgactcagactggaacccccagaatgatctccaagcccaagccagagcccacagg
attggacagaaaagacaggtgaatatctaccgtctggtgacgaagggctcagtggaggag
gacatcattgagagggcgaagaaaaaaatggtgctggaccaccttgtcattcagaggatg
gatactacggggaaaactgttctccatactggtgctgctccctccagttcagcccctttc
aacaaggaggagctgtcttccatcctgaagtttggtgctgaggagcttttcaaagaacca
gagggtgaggagcaggaacctcaggaaatggacattgatgagatcctcaaaagagctgag
accagggaaaatgaccctggcccctccacagtgggagaagaactgctgtctcagttcaag
gtggctaacttttccatgatggaagatgaggaaatagatattgactctgagcgtagtcag
cggagttgggacgatatcattcctgaggagcagaggaggaggatggaagaggaggagaga
cagaaggagctagaggaaatctacttgctgcctcgcatgaggaattgtgccaaacagata
aactttaacgccagtgagggccggcagagcaggaacaggaggtactctgggtctgacagc
gactctccctcagaccgaaaaaggccaaagaaacgaggacggcctcggaccattccgcga
gaaaatatcaagggcttcagcgatgcagagatccggaggtttgtcaagagttacaaaaag
tttggaggaccactggaaagattggatgctattgctcgtgatgctgaacttgtggataag
tctgaacatgatctgaaacgcttggcagagactgttcataatggctgtgtcagaacacta
cgagaaaacccctgtggaccagaaaagaactcaggaggcaggagagggaaagtgaagggt
cctacattcaggatttctggagtccaggtgaatgccaagcttgtcatctctcatgaggaa
gagctggctccactccacaaggccattcctgctgaccctgaagagagaaagaagtatatg
attccatgccactcgaaggcagcgcactttgacattgagtgggggaaggaggacgactcc
agccttctaataggaatctatgagtatggttacggcagctgggaaatgatcaagatggat
ccggacctcaatctcacacacaagctcctaccagacgaccccgacaagaagccacaggcc
aaacagctccagaccagagcagactacctcatcaagttgctaagcaaggacctggccaaa
aaagaagcacagaaacaaacagggacagccaattcacggaagaggaaaccaagaagtaaa
aagagcaaaactctgaaaccaactaagacagacgaggtgctaaagagcacgtcctcagat
cccccatcggacaagaggtcagatgatgaagatgaaattgaggacgaaaaggaggtgact
ccagtgaaggcaccaaacagacggagccgaacagacaggggggtggtgaaagaggaggag
gacgaggatgaagagcctgagcaggaggaagtttcttcatcaggggagagggaggtcaaa
gaaaaagagatcaaaaaagaaggcaaaaaggagaaaaaggaggaaagttgggacagtaaa
gagacaaaggagccaaaagagaaaaaagaaacaaagcctctggaggcagtacataaacaa
gaggagatcatagaaaagaatgaagtaaggactgaggtacgagaacgaacaaagaaagcc
tctgatgtgccagtccatataacagcaagtggagagaatgttccagtatctgaggagtct
gaggagctggaccagaggaccttcagtgtgtgtaaagagaggatgcggccggtaaaagca
gccctgaagcagctggacagaccagagaaagggctgtcggaacgtgagcagctcgaacac
acaagacagtgtctgataaagatcggagaccacatcacggagtgtctgaaggagtactca
aaccctgaccagatcaaacagtggagaaaaaacctgtggatatttgtttccaaattcact
gagtttgacgccaggaagctacataaactgtataagcatgcaatcaagaaaagacaagag
aacgctcaggcaatggagcagaacatgagaaatataaacgcccacggctacaaacatgca
gatattgaaaggctgaaggacaactctcaccaggacgagagcagcagggacagctacagc
tcagacaggcatcagtcttcagggcggttacatgaaagcagcagcagcagcagtaaggag
agacacagctctgagtcccacaggaagaccacgggaggggagtccaggaaaagaccatac
tcctccttcagcaacggcaaagaccaccgagatagagaccactacagaccagacagcagg
gacagagacagacaggacagatactacaatgacagtaagcacaggaagctggaagagttc
cgctctagcagagaccatcggctggacataaaggatcactcccattcagaccaccgctct
tcctaccgctaccactcagactggcagacggagcagcgagcctcagccagcgggccccgc
tctccccgagaccagcgctcaccctacgactctcgctcacccatgggacaccgctcccct
tttgactactcgtcagaccacaagagcacaccagagcagatctggagcagccgcaagaca
taa
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