Epinephelus fuscoguttatus (brown-marbled grouper): 125905822
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Entry
125905822 CDS
T08419
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efo04515
]
125905822 (pcdh17)
Cell adhesion molecules [BR:
efo04515
]
Cadherins
Protocadherins
125905822 (pcdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
125905822
NCBI-ProteinID:
XP_049460027
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Position
LG2:complement(35608079..35684386)
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AA seq
1141 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQVGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPTFPSNEIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREVQDEYN
VTIVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGES
GRLTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVNPIVELIIRVSDHGKPSLTAAARLI
IKASNGRPPDGLPHTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTANNLSAPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAT
GVKPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVP
ETETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASGSPTKG
CSTMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQTRDQGVYPPLPPSDPVA
KVLAEARSRISQEAAGEMECVLEQVEPDANRDRMDADQVVRDIDKLLQDCRGSEATGTLR
K
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctcctcttatgggctcaagccctgacattgaaaaac
ttgaattactctgtcccagaggagcagggtccggggacagttattgggaacattgccaaa
gatgccagactcggactcgaacaggttgggcagggaggacagggtaaaaaagccaacttc
agggtgctggagaactcagctccgcatctcatcgacgtggacccccaaagcggactgctg
tacacaaagcagcgcatcgacagggaaaccttgtgtaagagaaaccctaagtgccagctc
tccatggaggtgtttgccaatgacaaggagatctgcatgatcaaaatagatattcaggat
attaacgacaactcacccactttcccctcgaatgagattgatattgacatttctgaaaac
gcagtaccagggacacgctttcccctgaccagcgctcatgacccagatgcaggggagaac
ggcctgaaaacctatcaaataacacgcgatgactacaatctcttttccttggaggtaaaa
tcccgtggggacgggactaaattcccagaattagttattcaacgaccactggaccgagaa
gaacgaagccatcacactcttattttgtcagccacagatgggggggaatatcccaggtca
ggtaccatgcagataaatgttaaagttattgattccaatgataacagccctgtgtttgat
cagccctcgtatgttgtggaaattcctgaaaattcacctcctggtaaagtgctgatcgat
ttaaacgccactgatcctgatgagggcaacaatggacaagtagtctattctttcagtggc
tatgccccggagagaatccgggagctcttttccatagattccagaacaggggtcataaag
attcagggtgaaattgactacgaagagagtcctgttattgagattgacgtccaagcaaaa
gatctaggtcccaatccaatcccaggccattgtaaagtcactgttaaagtgcttgacagg
aatgataactggccgtctataggctttgtgtctgtgagacagggagccatcagcgaggca
gcacctccaggcactgtcattgctctggtccgtgtcacagacaaggactcaggcaggaat
gggcagcttcagtgcagagtgctaggtaatgtcccttttaaacttgaggagaactatgat
aacttctataccgtagtgacagacaggcccttggacagagaggtgcaggatgagtacaat
gtcaccattgtggccaaagacaatggcattccgcctctgaactccacaaagtccttcacc
gtaaagattctggatgagaatgacaatgtccctcgctttaccaagtcagtttaccttctt
caaatacctgagaataacatccctggggagtacctgggttcagttctggcacatgaccca
gaccttggccagaacggcacagtgtattacagcataatcaactccaacgtgagtgggggt
gatgtcaacacctatgttaatgtgaatgcagctaatggagccatctatgctgtgagatct
tttaactatgagcaaataaagtattttgactttaaggttcttgccagagatgcaggatct
ccacacctggagagcaacgctacagtgcgcatcagcgttctagatgtcaatgacaacatc
cctgtcatagttctgcccctactcctaaacgacacagctgaaatccatgtgccgcgtaat
gttggtgttggctacattgtcaccacagtgagggcagtggataatgactacggcgagagt
gggaggctcacatatgagatctcagatggcaatgaggagcacctctttgagattgatccg
gtgactggggaggtgcgaacagcccatccattctgggacgacgtgaaccccattgtggaa
ttgatcatccgagtatcggaccacggcaagccaagtcttactgcagctgccaggctcatt
atcaaggcctccaacggacgtcctcctgatggactgccacacacgaaggacaatcagaac
tgggacatgtccctgcctcttattgtgactctaagcatcatatccatcatgcttctggct
gccatggtgaccatagcgatcaagtgcaagcgggaaaacaaggagatccgtacctataat
tgtcgcattgcagaatactcgcaccctcagctggggaaaggcaagaagaagaagattaac
aagaacgacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaaggtcagaggtcatgtacctcaagcccactgccaataacctc
agcgctccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcact
acagacacacctactaaccgcatgtccatcatacagacggacaatttccccactgagcct
aattatatgggcagcagacaacagtttgttcaaagtagttcaacattcaaagacccagag
cgagcgagcctcagagacagtggtcatggggacagtgaccaggctgacagcgaccaggac
accaacaaaggctcctgctgtgatatgtctgcgaaagaagccctcaagttgaaggctaca
ggcgtcaaaccaccacctttggagcaagatgaggattgtgtaaattgtacggaggagtgc
cgagtactgggtcattctgaccgctgctggatgccccagttccccgctggaggaaaccag
gcagagggtgtcgactaccgcaacaatatgtttgtgccggcggggatggagactgttccc
gagacagagacctacgagactgtcaaccccaatggcaagaagacgttctgtacgtttgga
aaagagaggcgtgatcacaccatcctggtcgccaatgtcaagccctacttgaaggcaaaa
cgtgccctcagtccactgctccaagaggtaccttcagcctctggcagtcccactaagggc
tgctccaccatgtctccctgctcttcagtcaaaagcccagctgacggagctgaaggcaaa
cctccccctgccacctgctctggccactacgggcctcctgatggtcagtacctgtcacca
accaaacaaaccagagaccagggggtctacccacccttgcctccctcagacccagtggcc
aaggtgcttgcagaggcccgctccaggatcagccaagaggcagcaggtgaaatggagtgt
gttctggagcaggtggagcccgacgcgaaccgtgacagaatggacgctgaccaggtggtg
agagacatcgacaaactattgcaggactgcagaggaagtgaggccactggcacactcagg
aagtga
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