Epinephelus fuscoguttatus (brown-marbled grouper): 125905841
Help
Entry
125905841 CDS
T08419
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125905841
04091 Lectins [BR:
efo04091
]
125905841
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125905841
Lectins [BR:
efo04091
]
C-Type lectins
Others
125905841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
GPS
REJ
PKD
DUF7504
SAGA-Tad1
DUF2209
Motif
Other DBs
NCBI-GeneID:
125905841
NCBI-ProteinID:
XP_049460065
LinkDB
All DBs
Position
LG2:complement(27810360..27838974)
Genome browser
AA seq
2485 aa
AA seq
DB search
MLVQPSPSSFCHVSSKEDTEALSCPEYQEGFDGSCYEFVGLQRSFLSAQGWCERGGGHLA
FILNDETQQFLQKHLDPEKDWWLGLAPAAPNLTLDSAATEAFPSLAWLDGSDVSYSNWVN
TPDAGAACGHVLKHSGFQWEAPGNCSQELNFICQFDSGRSVACDGQNATLQCGSGQVIEI
DDSFYGRKTIHYCRSKLTASPMSSQEECSWIDVIDSVTAHCHGLQACQSPVDLSTFGEPC
PVLGSYLSIEYHCKHGLHLLMSKLAAVFDNVTITVKWLLHPFQGNLTCTLNAGDGHTIDP
YSPEEMESTVMHKFTRPGVFMVIVECTTSDWHVTAQKAITIQEPIGEFGVIECYSRNTST
GGTKCSALHGRPVQIQVMVEAGTNVSYTIQHEGHLVANSSVESGITPHNITLSASVVERL
GHSCHNLTLTASNKVTAHTVSTALELCLLEPVEGLQASVIAEEDTCPDSPDLIIGVSLDR
GAPVELLFTLSGARDTISETRDMLSGSLQTYTFSNPIEGPLEVKVRAVNAFSASEVDVDL
EKIIWACQNYSDFSPDEHKNTTGSVSIDDLKITATPDNLVDYTQNVTLSVTGTESFPRKG
LTFEWECKENCKCRNKTKDETHVIERDCLPDPFDMFKYVLTVGRSTWFRKWVELASASKC
ITVAPEEFTDVSISCDNCALINVNDHVKLKLSCVRTCPHVGWFIEDPKPEEGDLLKCYSK
AGRRPPIERQDGNTEYTLHSQHLKVSRDTLQNISVIAYGKNEPGFARYIFPIPAPEPTEA
AATDAPADSTPPSCSISPTSGTVLDAFDITCSVNSFCSAGCVYCFKTDTGKHLRCSNANE
VKSVFLPLGDKNNNYSLSVVVTVKNEHEKATTAVTTQVRKSSSSASVEALQSAVEDTVSQ
LEQQGLLSGEALGQIFTSVSDMLNTEDSQDQKDARAELRKQMLTKMTTVLMESPSNTTQK
VQVTARAVAGLTQRPDELSPAAQEEAGSLLVDLSASLNTISVNQDDGDDGEVVQAAAPIV
EAASNILNVSSNKKVSDFLLSGINNVQSALLNNKKLNGDPAIIDSGQISVYVNRVSPGNM
QMQDINVQKNSSSRFSFPTLPAHIVSPEEPVDVRMMSFEKNPYSWKEENITGTVGSVSLT
RMNGTVIPVENLPDEIEILLPRLDVAQENSTVLDLANFSTLIIDVPSPDVTLVLKMEPSE
NISFMLFLGFKDYPDDENYVAKTQIPLDSAKEEEQYTWVLSPKDRAAETGKHYLVMKPIV
EPGVKSISATVTVISIAAQCKYWNESGSYWSEDGCRVGPLTTPLVTQCLCNHLTFFGSSF
FVMPNLVDVSRTAELFATFTNNPVVVCFVGAIFVAYLLVVVWARRKDIQDSAKVKITVLE
DNDPLAEYHYMLNIGTGHRHGASTSSQVTITLLGTEGESEPHHLTDPEKPVFERGGVDMF
LLTTHFSLGDLQSIRLWHDNSGAHPAWYVNKVTVQDLESGQKWHFLCNSWLAVDVGECSL
DKVFPVATEMDLKRFSNLFFMKTAKDFRDGHIWFSVISRPPCSTFTRVQRVSCCFSLLLC
TMLTSIMFWGIPTDPSEQTMDLGHIEFTWQQVMIGIQSSIIMFPINLLIVSIFRNTRPRE
MGAKTDSSKQGKTGRVSPSQTSSPQKELKDITPDTVIKDIKRIAQSLSKAMKSPLPHLEL
RPGQPADINTLLSLVEDIIRQQNGAAGDFYSDASKRDRSMILSLRAVNLQENNVWRSPEK
TSDEVQKKTSNSRYLYKQLRHVEKELGLLGPSRFPNPDSFNRAMQQVHGMKGLLEYHLPS
SSLEGDQGDRSPSPEESVNGDSAKKCCQGGLPWWFVFVGWILVIATSGVSGYFTMMYGLT
YGKDRSISWLISMVVSFFESLFITQPLKVLGFAAFFALVLKKVDQEEYGELQIDDSLRNT
DDLDAVRAARRDSTCSFYQPPPPTDIEKIRNNMIKEQKVFALIREILAYMGFMWMLLLVA
YGQRDPNAYFLTQHIRQSFSKGISDSMSIQDVFNWANTTLLSNLFGEYPGFITDGNSKLV
GNARLRQVRVHQDSCQVAPSMQQSGRDCHAPYSWELEDMGSYGPGWSRSLGGNTSLNHHS
PWTYQSQGKLRAFPIWGSVKLYRGGGFVVDLGPDLQNSSRSLQYLYDNTWFDMYTQAIFV
EFTVYNANVNLFCIVTLMLETTAIGAFQFCSELQSVRLYQSTGGLHIFVMASEAIYFLFI
IYYMFVQGKLMKQQRWAYFKSKWNLLELGIIILSWSALSVFIKRTLLGKRDMEYYQNNKD
QYASFHETAKADAVLGYLIAFLVLLATVKLWHLLRLNPKLHMITATLQRAWTDISGFLVV
MTIMFLAYSIASNLMYGWKLYSYRTLLDAAQTMVNLQLGIFNYEEVLNYNPVLGAFLIGS
CIVFMTFVVLNLFISVILVAFSQEQIHHEPSEEDEIVELMLMKLFSLFGLKCKKQSGDCR
AERAAVSSAFNNGLSTISTGNICEG
NT seq
7458 nt
NT seq
+upstream
nt +downstream
nt
atgttagttcagccgtcaccttcaagtttctgtcatgtctcctcaaaggaggatacagaa
gctctgtcctgcccagaataccaagagggttttgacggctcttgctatgagtttgtgggc
ctgcagcgatccttcctcagtgcccaggggtggtgtgagcgaggcggaggacacctagcc
ttcattctgaatgatgaaacgcagcagttcctccagaaacacctggacccggagaaggac
tggtggctcgggctggcacccgcagctccaaacctcacgctcgactctgctgccactgag
gcttttcccagccttgcgtggctggatggctcagatgtcagctatagcaactgggtgaac
acgccagatgcaggagcagcctgtggacatgttctgaaacattcaggcttccagtgggag
gccccaggaaactgcagccaggaactgaactttatttgccagtttgattctgggagatct
gtcgcatgtgacggccaaaatgcaacactgcagtgtggctctggtcaagttatagagata
gatgacagcttctatggtcggaaaactattcactactgccgatccaaactcacagcctcg
cccatgtcctcacaggaggagtgcagctggatagatgtgatagattctgtaacagcccac
tgccatggactgcaggcttgccagtctccagtggatctgagcacctttggtgaaccatgt
cctgtgctgggaagttacctgtccatagagtaccactgcaaacatggactccacttgctg
atgagtaagctggcggccgtctttgataatgtcaccatcactgtgaagtggctccttcat
ccttttcaggggaacctcacatgcacactgaacgctggagacggccacactattgatccg
tacagcccagaagagatggagagcactgtgatgcacaaattcacccgtccaggtgttttc
atggttatagtagagtgcacaaccagtgactggcatgtcacagctcagaaagccataacc
attcaggagcccattggagagtttggtgtcattgagtgctatagcaggaatacgtcaaca
ggtggcactaaatgcagtgctcttcatggcaggcctgttcagatccaggtcatggtagag
gcaggtacaaatgtttcctacacaatccaacatgaaggccacttggttgcaaattcgtca
gtggagagtgggatcacaccccacaacattacactgagcgcaagtgtggttgagaggctc
ggacacagctgccacaaccttactctgactgcctctaacaaggtcacagcccacacagtg
tccactgctctggagctgtgtctgctggagcccgttgaaggcctgcaggcctcagtgata
gcggaggaagacacgtgtccagactctcctgatctcattattggtgtttcgttggaccga
ggagcccctgtagagctgctcttcacactgagtggagccagggacacgatttctgagacc
agagacatgctcagcggcagcttacaaacttatacgttctccaacccaattgaagggccg
ctggaggtgaaggtacgagccgtgaatgctttctctgcctctgaggtggatgtggactta
gagaagataatttgggcttgccagaattactcagacttttcaccagatgaacataaaaac
acaacaggcagtgtgagcatagacgacttaaaaataactgccactccggataatttggtc
gactacactcagaatgtcacactgagcgtaactggaactgaatcatttcccaggaaagga
cttacatttgaatgggaatgtaaagaaaactgcaagtgcagaaacaaaacaaaggatgaa
actcatgttattgagagagactgccttccagatccctttgatatgttcaaatacgttcta
accgtggggagatcaacctggtttaggaaatgggttgagcttgcgtcagcttcaaagtgc
atcactgttgctccagaagaatttacagatgtcagcatcagttgtgataactgcgctttg
ataaatgtgaacgaccatgtgaagctcaaactgagctgcgtgagaacttgcccacatgta
ggttggtttattgaggaccccaaacctgaagagggtgacctcctaaaatgttactccaaa
gcaggaaggaggccacccattgagaggcaagatggcaacactgaatatactcttcacagc
caacatttaaaagtttcaagggacacattgcaaaacatcagtgtgattgcttatggcaag
aatgagccaggatttgccaggtacatttttccaataccagctcctgagccaactgaagca
gctgcaactgatgcacctgcagactccacacccccctcatgcagcatctctccaacatca
ggaacagttctcgatgcttttgatatcacctgctcagtgaactctttctgctctgccggc
tgtgtttactgcttcaagacagacacgggcaaacatctgcgctgcagtaacgctaatgag
gtgaaatctgtcttcctgccactcggagataagaacaataattacagcttgtctgttgtg
gtgactgtgaaaaatgaacacgagaaagcaaccacagctgtcaccactcaggtacgaaaa
agcagctccagtgcctctgtggaggctctgcagtctgcagtggaggatactgtgagccag
ttagagcagcagggtcttctctctggtgaagcacttggacaaatatttacttccgtgtct
gatatgctgaacacagaggacagccaagatcagaaggatgcaagagcagagctcagaaag
caaatgctgaccaaaatgaccacagttctgatggagtcacccagcaacacaacacagaaa
gtgcaagtgacagcgagagctgtggccggactcactcaacgcccagacgagctcagtccc
gctgctcaagaagaagcaggttcattactggtagacctcagcgcctccctcaacactatc
agtgttaatcaggacgatggagatgatggagaagtcgtgcaagcagctgcaccaatagtt
gaagcagccagtaatattttgaatgtgtcctcaaataaaaaagtctcagattttcttctg
tctgggataaacaacgttcaaagtgctttgctgaataataaaaagctgaatggggaccct
gccatcattgattctggtcagatcagtgtgtatgtcaacagagtctctccaggaaatatg
caaatgcaggatataaatgtccagaagaacagctcttccagattttccttcccaacactg
cctgctcatattgtgtctccagaggagccagtggatgtcagaatgatgagttttgagaag
aacccgtattcttggaaggaggaaaacatcacaggaactgtcggatccgtctctctcacc
aggatgaacggcactgtcattcctgtagagaacctacccgacgagatagagattctccta
ccacggcttgacgtagcgcaggagaacagcacagtcctggatctggccaatttcagcaca
ttaataattgacgtcccctcgccggatgtaacactggtgctgaaaatggagccgtctgaa
aacatctccttcatgctattcctggggtttaaagattatccagatgatgagaattatgtc
gccaagactcagatccctctagatagtgccaaagaagaggaacaatacacctgggtgctg
agtcccaaagacagagcagcagaaactggaaagcactaccttgtcatgaagcccattgtt
gagccaggcgtcaaatccatcagtgccactgtcactgtcatttccattgctgcccagtgc
aaatactggaatgaaagtgggtcatattggagtgaagatggctgcagggttggtccactc
accacgcctctggtcacccagtgcctctgtaaccacttaacattctttggcagctccttc
tttgtcatgccgaacttggtggatgtgtcacgcactgcagaacttttcgctacattcact
aacaatcctgtggtggtgtgttttgtgggcgccatctttgttgcttatctcctggtggtt
gtgtgggcacgcaggaaagacatccaggactcagccaaggtcaagataacagtgctcgag
gataatgaccctttggctgagtatcattatatgctgaatatcggcacagggcatcggcac
ggtgcatccacctcctctcaggtgacaataactctgctgggcacagagggagaaagtgag
ccccatcacctgacagacccagagaagcctgtgtttgagaggggtggggtggacatgttc
ctgctgaccacacacttttcacttggagatctgcagagcatcaggctgtggcatgacaac
tcgggagcacatcctgcatggtatgtcaacaaagtaacggtgcaggatctagagagcggt
cagaagtggcacttcctgtgtaattcctggctggctgttgatgtgggagagtgctctctt
gacaaggtcttcccagtggcaacagagatggatttgaagaggtttagtaacctgttcttc
atgaagacagccaaagatttccgtgacggtcacatctggttctctgtaatcagtcggcct
ccctgcagcactttcacacgtgtgcagcgagtgtcctgttgcttttccctgctgctgtgc
accatgctgaccagcatcatgttttggggcatccccactgacccctctgagcagaccatg
gacctgggtcacatcgagttcacatggcaacaggttatgattggaattcaaagttcaatc
atcatgtttcccatcaatctccttatcgtgagtatcttcagaaacactcgtcctcgagag
atgggcgccaaaacagactcatctaagcaaggaaagactggtcgagtttctccctcacag
acatcttcccctcagaaggagctgaaggacatcacaccagacactgtgatcaaggacata
aagagaattgctcagtcactctcaaaggccatgaagagtccgctgcctcacctggagctc
cgacctggtcagccggcggacatcaacacactgctgtctctggtggaggacatcatcaga
cagcagaacggagcggcgggagacttctacagtgacgcctccaagagggatcgctctatg
atcctcagtttacgtgcagtgaatctacaagaaaataacgtgtggaggagccctgaaaaa
acatcagatgaagtccagaagaagaccagcaacagtcggtacctgtacaagcagctgcgt
catgtcgagaaagagctgggtttgttgggaccttctcgttttcctaacccagacagcttc
aaccgagccatgcagcaggttcatgggatgaagggtcttcttgagtaccacctcccctcg
tccagcctggagggagaccagggggaccgcagccccagtccagaagagagcgttaatgga
gactccgccaagaagtgctgtcaaggagggctgccttggtggtttgtgtttgtcggctgg
atactggtgatcgcaaccagcggtgtgtcaggatacttcaccatgatgtacgggctgacg
tatgggaaagatcgctctataagctggcttatctccatggtggtctccttctttgagagt
ctcttcatcactcagcctctgaaggttcttggttttgccgctttcttcgctctcgttctg
aagaaagttgaccaggaggagtacggagagctgcagatagatgacagtttaagaaacaca
gatgatcttgatgcggtgcgtgcagcaagaagagacagcacatgcagcttctatcagcca
cctcctcccactgacattgagaagataaggaataacatgattaaagagcagaaggtcttc
gccctcataagggagattcttgcctacatgggatttatgtggatgttgctcttggtggcg
tacggtcaaagggaccccaacgcttactttctcacccaacacattcgacagagcttcagc
aaagggatctcagacagtatgagtattcaggatgtgtttaactgggcaaatacaactctg
ctgagcaacctgtttggagagtacccaggattcatcacagatggaaactccaagctggtg
ggtaacgctcgacttcgccaggtgagagtgcaccaggactcctgccaggtggctccgtcc
atgcagcagtctgggcgggactgtcatgctccatactcgtgggagttggaggacatgggc
tcctatggtccaggctggagccgctcgctgggtggtaacacctcgctgaaccatcacagc
ccgtggacgtaccagtctcagggtaaacttagggccttccccatctggggcagcgtgaag
ctttacagaggaggagggtttgtggtggatctggggccagatttacagaattccagcaga
tcccttcaatacctttatgacaacacctggtttgatatgtacacccaagcgatctttgtg
gagttcactgtgtacaatgccaacgtcaacctcttctgcatcgtcacactcatgctggag
accacagccataggggctttccagttctgcagcgagcttcagagtgtgcgtctctaccag
tcgaccggcggccttcacatctttgtcatggcctctgaggccatctacttcctctttatc
atttattacatgtttgttcagggaaagctgatgaagcagcagagatgggcatatttcaag
agtaagtggaacctgcttgagctggggattatcatcctcagctggagcgcactgtctgtc
ttcattaagaggacattactaggaaagcgggacatggagtactaccagaacaacaaagac
cagtacgccagttttcatgagacagccaaggctgatgcggtgctggggtatctgattgcc
ttcctggtgctgctggctacagtcaaactgtggcacctgctgagactgaacccaaagctg
cacatgatcacggccacgctgcagcgagcctggactgatatctcaggcttcctggtggtc
atgaccatcatgttcctggcctactccatcgcatctaacctgatgtatggctggaagctc
tactcctatcggactctgctggatgctgcacagaccatggtcaacctgcagcttggcatt
tttaactatgaagaggttctgaattacaatccagtgcttggtgcttttctcatcggctcc
tgcatcgtgttcatgacctttgtagtgctcaacctcttcatctctgtcatcctggtggct
ttcagtcaagagcagatccatcacgagccatcagaagaggatgagattgtggaactgatg
ctgatgaaactcttcagcttgtttgggctcaaatgtaagaaacaaagtggcgactgccga
gctgagagggcagctgtctcatctgctttcaataacggactctcaaccatttctactggg
aatatttgtgagggttga
DBGET
integrated database retrieval system
