Epinephelus fuscoguttatus (brown-marbled grouper): 125905911
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Entry
125905911 CDS
T08419
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125905911 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125905911 (exosc2)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125905911 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
125905911 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
ECR1_N_2
EXOSC1
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
125905911
NCBI-ProteinID:
XP_049460179
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All DBs
Position
LG18:complement(18385560..18390110)
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AA seq
293 aa
AA seq
DB search
MAADMRLPTIQKPVSLSVSAFDRKDLVVPGDVITSDTGFMRGHGTYVDEEKLTASVAGEV
QRVDKLICVRPLKTRFNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGGEL
RRRSAEDELTMREYLQEGDLISAEVQSVFADGALSLHTRSLKYGKLGQGVLVQLSPSLIK
RQKTHFHNLPCGASIILGNNGFVWLYPTPEQQEVEAGGFYTSLEPVSLSDREVISRLRNC
LLALAAHKVLLYDTSVLYCYESSVQHQVKDILKPEVMEEIVMLTQQKLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacatgagattaccaactattcaaaaaccagtgtctttatcagtttctgct
tttgaccgaaaagatctggtcgtccccggcgatgttatcacatcagacaccggcttcatg
aggggtcatggtacctatgttgatgaagaaaagctgacggcttcagttgctggagaggtg
cagagagtagacaagctgatctgtgtcagaccactcaagaccaggtttaacggtgaggtt
ggagatgtggtggttggcagaatcacagaggtgcaacagaaacggtggaaggtggagacc
aactcccggctggattctgtcctcttgttgtcttctgtcaatctgcctggtggagagctg
aggagacggtcagcagaagatgagctcaccatgagagaataccttcaggagggcgatctc
atcagtgcagaggtgcagtctgtgttcgcagatggagccctatccctgcacacccgtagt
ttaaagtatggaaaattgggtcaaggagtgctggtacagctttctccttctctgatcaag
agacagaaaacacatttccacaacctgccatgtggtgcatccatcatcctcgggaataat
ggcttcgtgtggttgtatcccacaccggaacaacaggaagtggaggctgggggattctac
accagcctggagcctgttagtctgtcagatcgagaggtgatttcacggttgagaaactgc
ctactggctttggctgcacacaaggtccttttgtatgacaccagtgttctctattgctac
gaatcttcagttcaacaccaggtcaaggacatcttgaagccagaagtgatggaggagatt
gtgatgttgacacaacagaagctgcttgaacaggaaggttaa
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integrated database retrieval system
