Epinephelus fuscoguttatus (brown-marbled grouper): 125905937
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Entry
125905937 CDS
T08419
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
125905937 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125905937 (myo5b)
04131 Membrane trafficking [BR:
efo04131
]
125905937 (myo5b)
03029 Mitochondrial biogenesis [BR:
efo03029
]
125905937 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
efo04812
]
125905937 (myo5b)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125905937 (myo5b)
mRNA cycle factors
P-body specific factors
125905937 (myo5b)
Membrane trafficking [BR:
efo04131
]
Others
Actin-binding proteins
Myosins
125905937 (myo5b)
Mitochondrial biogenesis [BR:
efo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
125905937 (myo5b)
Cytoskeleton proteins [BR:
efo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
125905937 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
AAA_16
Ac76
Motif
Other DBs
NCBI-GeneID:
125905937
NCBI-ProteinID:
XP_049460222
LinkDB
All DBs
Position
LG18:complement(40500813..40559232)
Genome browser
AA seq
1822 aa
AA seq
DB search
MTSDYYPYSKLTRVWIPDPDDVWKAAEITRDYKEGEPVLHLKLEDETPLEYSVGPKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLQIY
GEEVILAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFNRHYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFTFTSLGENIFIEGV
NDAEDFKKTREAFTLLGIKDGSQSSIFKVVASILHLGNIEICSERDGESCHVSRDDLHLQ
HFCRLLGVELQQMEHWLCHRKLVTASETYVKNMSSAQAANARDALAKHIYARMFDWIVEH
INKSLHTSTKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYQQHSSSSAHF
KKPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQLVADLFHEKDDI
VPPKSSRVNVRAAKTTPKAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDDK
EAFTFDSRRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLLKKSDMTSADKKLV
CKNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRSACIKIQKTVRGWLQRVRY
RKIHKSAITLQRYGRGYLARRYADFLRQTRAALICQKQYRMVRERRAYLRVRQAVVTIQA
FTRGMFTRRIYWEFLLHHKAMIIQKYVRGWLQRTKFRRAREAAITIQCAFRCVRAKRQLQ
QLKIEARSAQHLKKLNTGMENKIVQLQRKMDDQSKEYRTQAEQLVQVNTSLSSEVDKLQK
QLEHVRSQQVGGGQLTSLQEELERLREELQEAIAHRKRLEEEHSTEKLGLQQRVEELETE
NTLLKSEKEEMNQKILQQSKRSEEDGSSMSQKEASLQKELDDERQRYQNLLKEFSRLEQR
YDNLKEEVSLTKFHPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDSIQLVEEMGVEKAA
MDISLFMKLQKRVRELEQERKRLQVNMDKMEELVKRKGSESRSPPSEQETADLAYNNLKR
QELESENKKLKNDLNELRKTIAERAAQNNSSNELQDSYNLLLSQLKSANEELDARKEEVL
ILRTQIVSAVQLQEKNDHMQEMNKVPDVDDSKEPADKEEALKAYHGLCESKKLLEAQLQT
QSRQHKDELEALHTQIELLRVDIEKKQELLNYTSSLSPEAQVEYSVQQEITRLTNDNLDL
KELVEKLEKNERKLKKQLRIYMKKVQELEVSQAAAQSSRSRPELSRQVTVQRKEKDFEGM
LEYYKEDEALLIKTLITDIRPNTVSATVPCLPAYILFMCIRHADYINDDQKVESLLTSTI
NAIKKVLKKNNDDFEMTSFWLANTSRLLHCLKQYSGDEAFMTQNTSKQNEHCLKNFDLAE
YRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIPSLAGVKPMGYRNRSSSMDTDT
GGPSSYTLEALIRQLGQFHGIMRDHGLDPEIVGQVVRQLFHCINAVTLNNLLLRKDVCSW
STGMQLRYNTSQMEEWLRANNLYQSKAAATLEPIIQAAQLLQVKKKTTQDAEAICSLCTA
LTTQQIVKILNLYTPLNEFEERVTVSFIRNIQNRPQQRNDAPQLLVDTKYMFPVLFPYTP
SALSLETLHIPASIGLDFLVRV
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgattattacccgtactccaagttgacccgggtgtggatccccgaccctgac
gatgtgtggaaggctgcagagatcaccagagattataaagaaggagagccggtgcttcac
ctcaaactggaggatgagacgcccctggagtactccgtgggtccaaaaagtaaccctctt
cctttcctacgtaaccccgacatcctggtgggagagaacgacctcacggctctcagttac
cttcatgaacctgcagtcctgcacaaccttaaggtccgcttcctggagtccaaccacatc
tacacctactgtggtattgtgctggtggccatcaacccgtacgagcagctgcaaatttac
ggagaggaggtgatcctggcgtacagcggtcagaacatgggggacatggaccctcatata
ttcgctgtggctgaagaggcctacaaacagatggccagagacgagaggaatcagtccatc
attgtgagcggagaatctggagcaggaaagacggtttctgcaaagtacgccatgcgtttc
ttcgccacggtgggtggttcagctaatgacactaacgtggaggagaaggttctcgcctcc
agtcccatcatggaggctattggaaacgcaaaaaccactcggaacgacaacagcagtcgc
tttggaaagtacattcagatcggtttcaaccgacattaccacatcatcggtgccaacatg
aggacgtacctgctggagaagtctcgggtggtgtttcaggctgaagatgagaggaactat
cacatcttctaccagctgtgtgcctccgccagtttacctgagttcaaagacctcagcctc
accagcgcagaggatttcaccttcacgtctctgggagagaacatcttcatcgagggagtg
aacgatgccgaggactttaagaagaccagagaggccttcacgctgctcgggattaaggac
ggaagtcagagcagcattttcaaagtggtcgcctccatcctccacctgggaaacatcgag
atctgctccgagagggacggcgagtcctgtcacgtctcaagagacgacctccacctgcag
cacttctgcaggctgctgggggtggagctgcagcagatggagcactggctctgtcacagg
aagttggtcacagcgtctgagacgtacgtgaagaatatgtcgagcgcacaggcggccaac
gcccgcgacgcgctcgccaaacacatctacgcccgcatgtttgactggatcgtggagcac
atcaacaagagcctgcatacctccaccaaacagcactccttcattggagtcctggacatc
tatggcttcgagacgttcgaggtcaacagtttcgagcagttctgcatcaactacgccaac
gagaagctccagcagcagttcaactcgcatgtcttcaagctggagcaggaggagtacatg
aaggagcagatcccctggactctgatcgacttctacgataaccagccctgcattgacctg
attgaggctcgcctcggcatcctcgacctgctcgatgaagagtgtaaagtgcctaagggg
acggatcagaactgggcccagaagctctaccagcagcacagcagcagcagcgcccacttc
aagaaacctcgtatgtccaacacctccttcatcatcatacacttcgctgataaggtggag
tatcagtgtgaaggctttctggagaagaacagagacactgtgtacgaggagcagatcaac
atcctgaaggccagtcagtttcagctggtagcagatctgttccatgagaaggacgacatc
gtcccaccaaagtcttccagagtgaatgtccgcgcagcgaagaccacccccaaagctccc
aacaaggagcacaggaagactgtgggacatcagttccgcagttctcttcacctcctcatg
gagactctgaatgcgacgactcctcattacgttcgctgcatcaaaccaaatgacgacaaa
gaggcgttcacgttcgactcgaggcgagccgtgcagcagctccgagcctgcggagtcctg
gagaccatccgtatcagtgcggccgggtatccatccaggtggacgtacccagacttcttc
agcaggtatcgagtgttgttgaagaagtccgacatgacgtcagctgacaagaagctggtg
tgtaaaaacctgctggagactctgatcaaggagccggacatgttccagttcggtaagaca
aagatcttcttcagagcaggacaggtggcgtacctggagaagctccgggccgacaagttc
cgctcggcgtgtatcaagatccagaagacggttcgaggttggctgcagagagttcgatat
cgcaagatccacaagtccgccatcactctgcagagatacggccgaggatacctggctcgc
agatatgccgacttcctgcggcaaactcgagctgccctcatctgtcagaaacagtaccgc
atggtgagagagcgacgggcctatctgagggtgagacaggccgtcgtcaccatccaggca
ttcaccagagggatgttcacccgccggatctactgggagttcctgctgcaccacaaggcc
atgatcatccagaagtacgtccgcggctggctgcagaggaccaagttcagacgagcgcgc
gaagccgccatcaccatccagtgtgccttcagatgcgtgcgagcgaagcgccagctgcag
cagctgaagatcgaagctcgctccgcccaacacctgaagaagctcaacacgggcatggag
aacaagatcgtccagctgcagaggaagatggacgatcagtccaaagagtacaggactcag
gctgaacagctggtgcaggtcaacaccagtctgtcctcggaggtggacaagctgcagaag
cagctggagcacgtccgcagtcagcaggtcggaggaggtcagctgacctcactgcaggag
gagctggagaggctgagggaggagctacaggaagccatcgcccacaggaagaggctggag
gaggagcacagcaccgaaaagctggggctccaacagagggtggaggagctggagacggag
aacactctgctgaagagtgaaaaagaagagatgaaccagaagattcttcagcagtcaaag
agaagtgaagaggacggcagcagcatgtctcagaaggaggcgtctctgcagaaggagctg
gatgatgagcggcagcgttaccagaatctgctcaaagagttctccagactggagcagcgc
tatgacaacctgaaggaggaggtgtccctgaccaagttccaccccggccacaggaggaac
ccgtccaatcagagcagcctggagtcggactctaactacccgtccatctccacctcagag
attggagacactgaggactccatccagctggtggaggagatgggggtggagaaggctgcg
atggacatcagtctgttcatgaagctgcagaagagagtccgagagctggagcaggagagg
aagagactgcaggtcaacatggacaagatggaggagctcgtcaagcgcaagggctccgag
tcgaggagtcccccctctgagcaggagacagctgacctggcctacaacaacctcaagaga
caggagctggagtcagagaacaagaagctgaagaacgacctgaacgagctgaggaagacc
atcgctgagcgagcagctcaaaacaactcgtccaacgaactgcaggacagctacaacctg
ctgctcagtcagctcaagtcagccaatgaagagctggacgctcgcaaagaggaagtcctg
atcctgaggacccagatagtgagcgccgtacagctccaggagaaaaacgatcacatgcag
gagatgaataaagttcctgacgtggacgacagcaaagagccggcggataaagaggaagct
ctgaaggcgtatcatggactgtgtgagtccaaaaagctgctggaggctcagctgcagact
cagtccaggcagcacaaagacgaactggaagctctccacactcagatcgagctgctgaga
gtcgacatcgagaagaagcaggagctcctcaactacacgtcgtctctgtctcctgaggct
caggtggagtacagcgtccagcaggagatcacacggctcaccaacgacaacctggacctc
aaggagctggtggagaaactggagaagaacgagaggaagctgaagaaacagctcaggatc
tacatgaagaaagtccaggagttagaagtgtctcaggctgcagctcagtccagcaggtcc
aggcctgagctgagtcggcaggtcaccgtccagaggaaagagaaggactttgagggcatg
ttggagtactacaaggaggacgaggccctgctgatcaaaaccctgatcacagacatcagg
cccaacacagtgtcggcgacggttccctgtctgcccgcttatattctcttcatgtgcatc
cgccacgccgactacatcaacgacgaccagaaggtggagtctctgctcacctccaccatc
aacgccatcaagaaggtcctcaagaaaaacaacgatgactttgagatgacgtccttctgg
ctggcgaacaccagccggctgcttcactgtctgaagcagtacagtggtgatgaggcgttt
atgacgcagaacacgagtaaacagaacgaacactgtctgaagaacttcgacctggccgag
taccgacaggtgctgagtgacctctccatccagatctaccagcagctcattaaagtggca
gagggcatcatacagcccatgatcgtgtcggccatgttggagagtgagagcatccccagc
ctggcgggggttaagccgatgggctacaggaaccgctcgtccagcatggacactgacacc
ggcggccccagcagctacactctggaggccctcatcaggcagctaggacagttccacggc
atcatgcgggaccacggtctggaccctgagatcgtgggtcaggtggtccgacagctcttc
cactgcatcaacgccgtcaccctcaacaacctgctgctgcgcaaagacgtgtgctcctgg
agcaccggcatgcagctcaggtacaacaccagtcagatggaggagtggctcagagccaac
aacctgtaccagagtaaagctgcagccactctggagcccatcatccaggccgctcagctg
ctgcaggtcaagaagaagaccactcaggacgccgaggccatctgctcgctgtgcactgcc
ctcaccacccagcagattgtgaagatcctgaacctctacacgcctctgaacgagtttgag
gagcgcgtcacagtgtccttcatcaggaacattcagaatcgtcctcagcagagaaacgat
gctcctcagctcctggtggacaccaagtacatgttccccgtcctcttcccgtacaccccg
tctgctctcagcctggagacgctgcacatccccgcctccatcggcctcgacttcctcgtc
agagtctga
DBGET
integrated database retrieval system
