Epinephelus fuscoguttatus (brown-marbled grouper): 125906097
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Entry
125906097 CDS
T08419
Symbol
nup54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125906097 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125906097 (nup54)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125906097 (nup54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
125906097
NCBI-ProteinID:
XP_049460467
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Position
LG18:13801286..13811911
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AA seq
589 aa
AA seq
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MTAVNMAFSFGGATSNPAASTSGFSFGSFGAKTTASSATFGFGAAAPTTTTTASSGFGTL
TAPGFGAATTTAAAPATGFSFGSTNTGFGGLGAGSTTAGAFGGFGTTTTTAAAPGSTFSF
AAPTNTTGGLFGNTQNKGFGFSSGLGAGTTAGTTGFGTGLGTTGLGGFGGFNIQQTQQQP
GGLFGQQAQQQGQAQHTQLYQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNN
SQPVDFTQENPFCRFKAVGYSCVPVSKDEDGLVVLLFNKKEADVRAQQQQLVESLHKVLG
SNQTLTVNVDGVKALPSDQTEVIIYVVERSPNGTSKRIPASTLFSYLEQANIKVQLTQIG
VAMSVARTELSPTQLKQLLQNAPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFKELLHRLQ
IQEQMTKQHQTRVDIISSDISELQKNQATTVAKIAQYKRKLMDLSHRVLQVLIKQEIQRK
SGYAIQVDEEHLRVQLDTIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRSEERYSVDAD
LLREIKQHLKQQQDGLSHLISVIKDDLEDIKLIEHGLSDSGHMRGGILS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagtcaacatggcgttcagttttggcggcgccacgagtaacccagctgcaagc
acgtccggattttcattcggttcatttggtgccaaaaccacagcatcatcagcaacattt
gggtttggggccgcagcccccaccacaaccaccaccgcctcatccggattcggcactctt
actgcccctggttttggggctgccaccaccactgctgctgcaccagccacaggatttagt
tttggctccaccaacactggatttggggggctgggagctggaagcaccacggctggcgca
tttggtggctttgggacaactacaacaactgctgctgcgccgggttccacttttagcttt
gctgctcccaccaacaccacaggaggcttgtttggtaacacgcagaacaaagggtttggg
ttctcctctgggcttggcgctgggaccactgctgggacaacaggatttggaactggatta
ggaacaactggcctgggtgggtttggaggctttaacatccagcagactcagcagcagcca
ggaggcttgttcggccagcaggcccagcaacagggtcaggctcagcacacccagctttac
cagcaggtcactgctctgtcagctcccaccttgttaggagacgagcgtgactccatctta
gccaaatggaaccagttacaggcttactggggcactgggaagggctactacagcaacaac
agccaacctgttgacttcacccaggaaaacccattctgcaggttcaaggcggtgggctat
agctgcgtcccagtgagtaaagatgaagatggtttagtggtcttactctttaataaaaag
gaagctgatgtgagagctcagcagcagcaactggtggagtccctccacaaggtcctggga
agcaaccagacactcactgtcaacgtagacggtgtcaaagccctgcctagtgaccagaca
gaggttatcatttatgtggtagagcgttcccctaatggcacctccaagcggatccctgcc
tccacactcttcagttacctcgagcaggccaacatcaaggtccagctcacacaaatcgga
gtggccatgtctgtcgcgcgcacagagctgtctccaacacagctcaaacagctgctgcaa
aatgcacctgcaggagtggaccccatcatttgggagcaggctaaggtggacaaccctgac
ccagagaaattaataccagtgcccatggtgggttttaaggagctgcttcaccgactgcag
atccaggagcagatgaccaaacagcaccaaaccagagtggatattatctccagtgacatc
agtgaactgcagaagaaccaggcgaccacagtggccaagattgcccagtacaagaggaag
ctgatggatctctctcacagggtgctgcaggtgctgatcaaacaggagattcaaaggaaa
agtggttatgctatccaagtggatgaggagcacctccgggtgcagctggacaccattcag
tctgaactaaatgcccccacacagttcaagggtcggttgaatgaactaatgtcccaaatc
cggatgcagaatcactttggagctgtgagatcagaagagcgctacagtgttgatgcagac
cttctcagggaaatcaaacaacacttgaaacagcagcaggatggtttaagtcacttgatc
agcgtcatcaaagatgacttggaagacatcaaactcatagagcacgggctgagtgacagt
ggacacatgagaggaggcatcctgagctga
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