Epinephelus fuscoguttatus (brown-marbled grouper): 125906130
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Entry
125906130 CDS
T08419
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
efo03009
]
125906130 (ddx54)
Enzymes [BR:
efo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125906130 (ddx54)
Ribosome biogenesis [BR:
efo03009
]
Eukaryotic type
Pre-60S particles
Helicases
125906130 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
CMS1
DRTGG
Motif
Other DBs
NCBI-GeneID:
125906130
NCBI-ProteinID:
XP_049460516
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All DBs
Position
LG18:complement(18300558..18308610)
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AA seq
871 aa
AA seq
DB search
MAQRKKKLTKKKRHTANREPEADSDSGDFELAAEIKDDDSPGRKLPRFPTTSDCLSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDIVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTSLKTAL
ILGGDRMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAE
QLQEIIQRLPDTRQTLLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLSDQIKLSFFHLR
MDDKQALLLHLLRNVVKPQEQTVVFVATKHHVEYLKELLISEGVECAYIYSALDQTARKI
NIGKFVHRKAMVLIVTDVAARGIDIPMLDNVINYNFPSKPKLFLHRVGRVGRAGRSGVAY
SMICPDEMPFVYDLHLFLGRPVQFATPEHTQDSEGVFGRVPQSILDDESSHLITAHENSQ
DLQNLHHVSENAYKQYLKSRPNPSPESIRRVKSTDLSSMGVHPFLGSGLEKMELERLHLV
DAIKGYKSKSTIFEINSNSKTQAGEVMRTKRSKDTRLVEKFKKQRDSLAEESQLHQSANP
STSTSTADNFTHTTGEDEDDIKGVFSAVVGGKKRGQHADGEDHQKNKRSRQSGKDEEYYI
PYRPKDFNSERGLSLGREGSAFEQQASSAVLDLMGDEGDRLNQHKNMMKWDRKRKRFVKE
AGKEDQKKKLRLDGGQVIDNKKNKKNFYEEWKKRYKIDDGGSGSDGEAGGARGVRRPGGG
RGRGRGRGRGHGPNFQSPVRAQQTPGGSRVRSELKTKEQILKQRKKNQKHQFLQSGGLKN
LRKKNKQWLGEVKKSGFGRGGQKKGKMRKKL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaggaagaagaaactgacgaagaagaagagacacacagccaacagggagccg
gaggcagactctgacagcggagactttgagctggctgctgaaattaaagacgatgactct
ccagggaggaaactcccacggttcccgaccacttcagactgcctgtcagatgtggagcct
gacaccagggagctggtcagagcacagaacaagaagaaaaagaagtctggaggctttcag
tccatgggtctcagttatcctgtatataaaggtgtcatgaagaagggttacaaagtccct
actccaatccaaagaaagacgatcccagtgattttggatggcaaagacattgtagctatg
gctaggactggcagtggtaagacggctgccttccttgtgcccatgtttgagaagctgaag
gcccctcaagcccaaacaggagccagggccctcatcttgactcccaccagagagttggcc
ctgcagaccatgaagttcacaaaagagttggggaaattcaccagcctcaagactgccttg
atcctcggtggagacagaatggatgatcagtttgctgctcttcatgagaaccctgacata
atcattggaacccccggtcgtctcatgcacgttatcaaggagatgaacttgaagctgcag
aatgtggagtacgtggtgtttgacgaggctgacaggttgtttgaaatgggttttgctgag
cagcttcaggagatcatccagaggctcccagacaccagacagactctgctgttctctgcc
acgctgcccaaactgctggtggagtttgccagagctgggctgactgaacccgtattaatt
cgtttggatgtggattcaaagctcagtgaccagattaagctgtcatttttccatctgcgt
atggacgacaagcaggcactcctgcttcacctgttaaggaacgtggtgaagcctcaggag
cagacagtggtttttgtagccaccaaacaccatgtagagtaccttaaggagctgctgatt
tcagaaggtgtggagtgtgcctacatctacagtgccctcgatcagactgccagaaaaatc
aacatagggaaatttgtgcatcggaaagccatggtgctaattgtgactgatgttgctgct
cgtggtatagacatccctatgctggacaatgtcatcaactacaacttcccctcaaagccc
aagctcttcttgcatagagttggtcgtgttggacgcgctgggcgcagtggcgtagcctac
agtatgatttgtccagatgagatgccttttgtctacgaccttcacctcttccttggaagg
cctgttcagttcgccacacctgaacacacacaggattcagagggtgtgtttggtcgagtc
cctcagagtatcctggatgacgaaagttctcatctgatcacggctcacgagaactcccag
gacctgcaaaacctgcaccatgtctcggagaacgcctacaagcagtatctcaagtctcga
ccaaacccctcacctgagtccatcagaagggttaaaagcacagatttgtccagcatgggt
gtccatccattcctagggtcaggtctagagaaaatggaacttgagcgccttcatttagtc
gatgccatcaaaggctacaaatccaaatctactatctttgaaatcaactctaacagtaag
acccaggctggtgaggtgatgcggaccaaacgctccaaggacacacggctggtggaaaaa
ttcaagaaacagagagacagcctggctgaagaaagccaactgcaccagtctgccaaccca
tccacttccacttccactgcagataatttcacacacaccacaggcgaagacgaggacgat
ataaagggggtgttctctgcagtggtaggaggtaaaaagcgaggccagcatgcagatggt
gaagaccatcaaaagaacaagagaagcagacagtcaggcaaagatgaggaatattacatc
ccctacagacccaaagacttcaactctgagagagggttaagtcttggaagagagggcagt
gcctttgagcagcaggcctcctcggctgtcctggacctcatgggagatgaaggagacagg
ttgaaccagcacaagaacatgatgaaatgggaccgtaagaggaagcgctttgtgaaagaa
gcaggaaaggaggaccagaagaagaagctcagactagatggtggacaggtcatcgataac
aagaagaacaagaagaacttttacgaggagtggaagaagagatacaagattgatgatgga
ggatctggctcagatggagaagcaggaggagctcgaggagtgaggagaccaggaggaggt
cgtggccgaggtcgtggtcgtggccgcggtcatggtcctaacttccagagccccgtcaga
gcgcagcagacgcctggtggcagcagagtgcgctcagaactgaagacaaaagagcagatc
ctgaagcaacgcaagaaaaatcagaagcaccagttcctgcagagtggaggcctgaagaac
ctgcgtaaaaagaacaaacagtggctcggagaggttaagaagtcaggttttggacggggt
ggtcaaaagaaggggaagatgaggaagaaactctga
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