Epinephelus fuscoguttatus (brown-marbled grouper): 125906194
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Entry
125906194 CDS
T08419
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efo04131
]
125906194 (vldlr)
Membrane trafficking [BR:
efo04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125906194 (vldlr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
Motif
Other DBs
NCBI-GeneID:
125906194
NCBI-ProteinID:
XP_049460614
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Position
LG18:complement(27041752..27134934)
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AA seq
864 aa
AA seq
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MVTSAPGILLLPMLICLQHCVDVHGTKTECEANQFQCGNGRCIPSVWQCDGDEDCTDGSD
ENSCVRKTCMEVDFVCRNGQCVPKRWHCDGEPDCEDGSDESVEICHMRTCRVNEFSCGAG
STQCIPIFWKCDGEKDCDNGEDEINCGNITCAPNEFTCASGRCISRNFVCNSEDDCGDGS
DEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDPDCKDGSDEANCPVRTCGPDQFKCDDGNCILGSRQCNGLRDC
ADGSDEVNCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLN
NGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQQMI
FWADLGQRAIYSTVLDKRGDVSTHNKVIDNVQTPVGIAVDWIYKNLYWSDLGTKTISVAN
FNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGADRQVLVVNDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSPDYLAHPFALTVFEDRVFWTD
GENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLP
APQINKHSPKYTCVCPEGQELAADGLRCRPDHSTKGSSKDDGKALIQPPSEANVSTSIQV
NSTARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDI
TRHGANVGHTYPAISIVSTDDDLS
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccgcaccggggatccttctgctgccgatgctaatatgtctccagcactgc
gtagacgtccacggtacaaagacagaatgtgaggccaaccagtttcagtgtggaaacggt
cgctgcatcccctccgtctggcagtgtgacggagacgaggactgcaccgatggcagcgac
gagaactcctgtgttagaaagacttgtatggaggtggactttgtgtgtcgcaatggccag
tgtgtcccgaagagatggcactgtgatggggagcctgactgcgaggacgggtctgacgag
agcgtcgaaatatgccacatgaggacgtgtcgtgtgaatgagtttagctgcggagcgggc
tccactcagtgtatccccatcttctggaaatgtgacggagagaaggactgtgacaacgga
gaggacgagatcaactgtggcaacatcacctgcgctccgaatgagttcacgtgcgccagc
ggtcgctgcatctcccggaactttgtgtgcaacagtgaggacgactgtggcgacggctcc
gatgaggtggagtgcgcgccgtcctcctgcggtcccagcgagttccagtgtgggaactca
tcgtgcatcccggccagctgggtgtgtgatgatgacgtcgactgccaggaccagtcagat
gagtctccgtctcgttgcggccgtcacccaacaccgcctgccaagtgttcctccagtgag
atgcagtgccgctcaggagaatgtattcacaagaagtggaggtgtgatggagaccctgac
tgcaaggatggcagcgatgaagccaactgtcctgtacgcacttgtggaccggatcagttc
aaatgtgatgatggaaactgcatcctgggcagcagacagtgtaacggcctcagagactgc
gccgatggatcagacgaagtcaactgtaaaaacatgactcagtgtaatggaccagagaag
ttcaagtgtcgcagtggagagtgtatcgagatgagcaaagtgtgcaacaaggcccgagac
tgtcccgactggagcgatgaacccattaaggaatgcaatctaaacgagtgtctcctgaac
aacggtggctgctctcacatctgcaaagacatggtgattggcttcgagtgtgactgcaca
cctggacttcagctcatagaccacaagacctgcggagacatcaatgagtgtctgaacccc
ggcatctgcagtcagatctgcataaacctgaagggtgggtacaagtgcgaatgccacaac
ggctaccagatggatccgaccaccggagtctgcaaggctgtcggtaaggaaccctgcctg
atcttcactaaccgccgtgacatccgtcgtctgggtctggagaggaaggagtacactcag
attgtggagcagcagaggaacacagtggctctggatgcggactttgaccagcagatgatc
ttctgggctgacctgggccagagagccatttatagtactgtgctggacaaacgaggggac
gtcagtacccacaacaaagtgatcgataacgtccagactcctgtcggaatcgctgtggac
tggatctataagaacttgtactggtctgatctcggcaccaaaaccatttctgtagccaac
ttcaacggaaccaagcagaaagttctcttcaacagaggcctcaaagagccagcgtccatc
gctgtggatccgctgtctgggtttctgtactggtctgactggggggagccagccaagatt
gagaagtctggtatgaatggggcggacagacaggttctggtggtgaatgacatccagtgg
cctaatggaatcaccctggatctgatcaaaggcaggctgtactgggtcgattctaagctg
cacatgctctgtagcgtcgacctgaacggagacaacaggaagaaagtactccagtctcca
gactaccttgctcatcccttcgctctcactgtttttgaggatcgagtcttctggacggat
ggcgaaaatgaagccatctatggggcgaacaagttcacaggttccgacgtggtgacgctg
gccagcaacctgaatgacccccaggatatcatagtgtaccacgagctgatccagctgtca
ggtactaactggtgtgcggagaaaggtgaaaacggaggctgtagctacatgtgtctgcct
gcgccgcaaatcaacaaacactcccccaaatacacctgtgtgtgtccagagggacaggag
ctggctgctgacggtttacgctgcagacctgaccactctaccaaaggttcctcaaaggat
gatgggaaagctctaatacagccaccctcagaagccaacgtgagcacgtcgatccaagtg
aactccacagccagagggtctgcagctgcctgggccatactgcctgtcttgctgctggcg
atggcggcagcgggcggctacctgatgtggagaaactggcagctgaagaaccagaagagc
atgaacttcgacaaccccgtttacctgaagaccacggaggaagacctcaacatcgacatc
acccggcacggtgccaatgtgggccacacctaccctgcgatttcgatagtgagcacagac
gacgatttatcatga
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