Epinephelus fuscoguttatus (brown-marbled grouper): 125906309
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Entry
125906309 CDS
T08419
Symbol
itgb6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125906309 (itgb6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125906309 (itgb6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125906309 (itgb6)
04810 Regulation of actin cytoskeleton
125906309 (itgb6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125906309 (itgb6)
04515 Cell adhesion molecules [BR:
efo04515
]
125906309 (itgb6)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
125906309 (itgb6)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin beta subunits
125906309 (itgb6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
125906309
NCBI-ProteinID:
XP_049460822
LinkDB
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Position
LG2:33523277..33541111
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AA seq
782 aa
AA seq
DB search
MGLILLSLILRYWINTVEGSCSAGTAVTCDECLQLSSHCAWCTQENFTDWFSVSKRCDTL
DILLEKGCAKDQLEFPVSKGQILQDRPLGKKTGNVNSTQISPQKMALKLRPGSQMTFQVK
IQHTEDYPVDIYYLMDLSASMIDDLKMIKDLGSTLSKEMATLTSKFRMGFGSFVEKPVLP
FIKITEEELANPCSGVGSDCLPAFGYKHVLSLTSSTDKFNEIIRMQRVSANIDVPECGFD
AVMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMAGIVIPNDGQCHLDANNEYSMS
TVQEYPTLGQLIDKVLENNILLIFAVTEHQEPIYKNYANLIPGATVGVLATDSRNILELI
VTAYKELRSEIELEVLGDTEELQMSFTAICPNGTVLTDLKRCSNIKPGETVVFNVSVELP
GCLSGVRHFSLKPVGLQDSLEVELESLCSCDCRQPPEANSTQCTEGQGAFQCGVCVCQPG
FLGAQCECNEESALLSNCLANNESEICSGQGQCYCGQCVCHASSFGSIYGPYCECDNYSC
VRFRGELCGGHGVCDCGECHCESGWTGEYCNCSTSTEACMSEDGTLCSGRGRCECGHCVC
SVPGASGDRCEKCPTCGDACSSARPCVECHLQNKDDAEVCDQKCSVPKISINTTTDYDKS
PSMQCKLMMENECWISFNVVGGETGITTYDLQMFGCPETPNIPMIILGVSLSIVCIGLIL
LAVWKVLVSVHDRKEVAKFEAERAKAKWQTGTNPLFKSSTSTFKNVTYKNTQREKMITLD
HY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggggcttatactgctgagcctgattcttcggtactggatcaacaccgtggagggatca
tgttcagctggcaccgctgtgacttgtgatgagtgtctgcagctcagttcccactgtgcc
tggtgcacgcaggagaatttcacagactggttctcagtcagcaaaagatgcgacacactg
gatatcttgctagaaaagggatgtgccaaggaccagctggagttcccggtttccaaaggc
caaatcctgcaggatcgcccactcgggaagaaaacaggcaacgttaacagcactcagatc
tccccacagaaaatggcactcaagttacgacctggcagtcagatgactttccaggtcaag
attcaacacacggaggactatcctgtggacatctactacctgatggacctctctgcgtct
atgattgatgatctcaagatgatcaaagacttgggctccacgctgtctaaagagatggcc
accctcaccagtaaatttcgaatgggctttggctcttttgtggagaaacctgtcctgcct
ttcatcaagatcacagaagaggagctggccaacccctgcagcggcgtaggctcggactgc
ctgccggcgtttggctacaaacacgtcctgtctctgacgagcagcactgacaagttcaat
gagattatcagaatgcagcgtgtatctgcaaatattgacgtgcccgagtgcggctttgac
gctgtcatgcaggcagctgtttgtggggacaagataggctggaggaatgattccatgcgt
ttgctggtgtttgtcagtgacgctgactcacacttcgggatggacagtaagatggccggc
atcgtgattcctaacgatgggcagtgtcacctggatgccaataacgaatactccatgtcc
acagtgcaggagtatccaacgctcggtcagctgattgataaggtgctggagaataatatc
ttactaatatttgctgtgacagagcaccaggaacccatctataagaactatgcaaatctc
atacctggcgccacagttggagtcctggcgacagattcgcggaacatcctggaactgatc
gtaacagcatacaaagaactacgatcagagattgaactggaggtccttggagacacagag
gagctccagatgtcttttacagccatttgtccaaatgggaccgtcctcactgatctgaaa
cgctgctccaacatcaaacctggagagacggtcgtgttcaacgtgtctgtggagctccca
ggatgcctgtcaggcgttcggcacttctccctcaaaccggtgggtttacaggacagtctg
gaggtggaactggaatctctttgctcgtgtgactgccggcagcctcctgaagcaaacagc
acccagtgcaccgagggccaaggggctttccagtgtggcgtatgtgtgtgtcagccgggg
ttcctgggagcgcagtgcgaatgtaatgaggaaagtgctttgttgagcaactgcctcgca
aacaatgagtccgagatatgtagcggtcaggggcagtgctactgcggacagtgtgtgtgt
catgcatccagctttggaagcatctacggaccttactgcgagtgtgacaattactcctgt
gtccgcttccgtggggagctctgtggaggccacggggtgtgtgactgcggggagtgtcac
tgtgagagcggctggacaggggagtattgtaactgcagcaccagcactgaggcgtgcatg
tcagaggatggcactctctgcagcggacgggggagatgtgagtgtggtcactgtgtctgc
tctgtacctggagcatctggggacaggtgtgagaagtgcccaacgtgtggagacgcctgt
agctccgcaaggccctgtgtcgagtgccatctgcaaaataaggacgatgccgaggtgtgt
gatcaaaagtgcagcgtccctaaaatttctatcaacacaacaacagattatgacaagagc
ccttctatgcaatgcaagctgatgatggagaatgagtgctggatctcgtttaatgtcgta
ggaggtgagacagggatcactacctatgacctccagatgttcggttgccctgagactccc
aacatccccatgattattctgggggtctccctttccatcgtgtgtatcggcctgatcctg
ttggctgtgtggaaggtgctggtgtctgtccacgaccgtaaagaggtggccaagtttgag
gctgagagggcaaaggcaaaatggcagacggggaccaaccctctcttcaaaagctcaacg
tctacattcaaaaatgtaacttataagaacacacagagagaaaagatgattacactggat
cactactga
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