Epinephelus fuscoguttatus (brown-marbled grouper): 125906338
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Entry
125906338 CDS
T08419
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125906338
03041 Spliceosome [BR:
efo03041
]
125906338
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125906338
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125906338
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125906338
NCBI-ProteinID:
XP_049460899
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Position
LG18:8076475..8095516
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AA seq
387 aa
AA seq
DB search
MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKNT
NETTSTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQNTVSFAAQP
YSQWGQWYGNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGG
MVEPGQGVNGTVLTNQAGMSTAGYHTH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccaacccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gcactcattttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccttactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacaccaaccagccaaaagaaagacacaagcagtcacttccatgtttttgttgga
gatctaagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggactgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaacgccatacagcagatgggaggacagtgg
ttgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaaataca
aacgagacaaccagtaccaagcagctgtcttttgatgaggtggtcaaccagtccagcccc
agcaactgcaccgtctattgcggaggagtcaccacaggtctcacagagcaaattatgaga
cagaccttctcaccttttggccaaataatggaaattcgtgttttcccggacaaaggctac
tcatttgtgagattcaactctcatgaagcagcagctcatgccattgtgtctgtcaatggt
acatccatagagggctatgttgttaagtgttactggggcaaagaaacgacagacatggtt
agccccatacagcaggtacagatgcctcagcagaacacagtgagctttgcagcgcagccc
tactctcagtggggtcagtggtacggcaacacagctgcacagcagattggtcagtatgta
cccaatggatggcaggtgccaagctatggagtctatggacagacctgggatcagcagggc
tacaatcatttacatgctggtgccggttggacaggtgtgggcgctgtgagcaacgggggc
atggtggagcccgggcagggagtcaacgggacggtgctaaccaaccaggctggcatgagc
actgctggctaccacacccactga
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