Euwallacea fornicatus (polyphagous shot-hole borer): 136338941
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Entry
136338941 CDS
T10685
Symbol
Atg18a
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X1
KO
K17908
autophagy-related protein 18
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor04136
Autophagy - other
efor04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136338941 (Atg18a)
04136 Autophagy - other
136338941 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efor04131
]
136338941 (Atg18a)
03029 Mitochondrial biogenesis [BR:
efor03029
]
136338941 (Atg18a)
Membrane trafficking [BR:
efor04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
136338941 (Atg18a)
Mitochondrial biogenesis [BR:
efor03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
136338941 (Atg18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WDR90_beta-prop_4th
EIF3I
Beta-prop_EML
VID27
Motif
Other DBs
NCBI-GeneID:
136338941
NCBI-ProteinID:
XP_066137873
LinkDB
All DBs
Position
4:552021..561147
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AA seq
431 aa
AA seq
DB search
MTSSSSTDTNGSKNYFVNFNQDSTSLAVGGKFGYKLFSLGSVEHLEQIYSNANGDSRIVE
RLFSSSLVAMVSLAAPRKLKVCHFKKGSEICNYSYSNTILAVKLNRARVVVCLEESLYIH
NIRDMKVLHTIRDTPPNPKGLCALSSNSENCYLGYPGSSSVGEVQIFDAMNLNAKIMIHA
HDSPLAALAFTPNGLKIATASEKGTVIRVFSVTDGTKLFEFRRGVKRCVSISCLSFSMCG
QFLACSSNTETVHIFKLEEPRDSPKKSAEESSWMNYFSTYLPTQVTDVFTQGRAFATAYL
PIGGVKNVISIVYIKDGLRLLVATEDGVFYIYNFDSNEGGDLQLYKTYQLDDCGSDQADA
TPKAADSDKPIAGLLGSYAGIVKGNPSGRMSGTESEKLREMAQATEAPPPDGFHLTDDQE
YPPLTQNSDLD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgactagctcaagttccacagacaccaatggatccaaaaattatttcgtaaacttcaac
caagactcaacatcactagctgttggaggcaaattcggctataaactgttttcactgggg
tccgttgagcacctggagcagatctacagtaatgccaatggagactcccgaatcgtcgaa
cgcttgttcagcagcagccttgtggccatggtgtccctggccgcgcccaggaagctgaaa
gtgtgccattttaagaaaggaagtgaaatatgtaattactcatattcaaatacgatattg
gctgttaaacttaacagggccagggtggtggtctgtttggaagagagcctttacattcac
aacattagagatatgaaagttcttcatacaatacgagataccccgccaaatccaaaaggc
ttgtgcgccctaagttctaatagcgagaattgttatttgggataccctgggtcgtcatca
gtgggagaagttcagattttcgacgctatgaatttgaacgcaaagattatgatccacgcc
catgacagtccactagcagcgttagcatttacccctaacgggctaaaaatcgccactgct
tcggaaaagggaacagttataagagtattttcggtcaccgatggaacgaagctatttgag
ttccgaagaggagtgaaaagatgtgtttcaatatcctgtctttcctttagtatgtgtgga
caattcttagcctgcagtagtaacaccgagacagttcacatatttaagttagaagaacct
agagatagtcctaagaaaagcgcagaagaaagcagttggatgaactatttctccacgtat
ttacctacccaagttactgacgtgtttacccaaggacgagcctttgcgactgcttactta
cccattggaggcgtgaagaatgtcatttcaatagtttacatcaaagacggactcagactt
ttagtagctacagaagacggagtgttttacatatataattttgactccaacgaagggggc
gacctgcaattgtacaagacataccaactagacgattgcggttccgatcaagctgacgca
acgcctaaagccgccgatagtgacaagccaatcgcaggccttctaggtagctacgctggc
atcgtgaaaggaaacccctcgggccgaatgtcaggtactgagtcggaaaaactgcgggaa
atggcccaagccactgaagctcctccaccggacggttttcacctgacagacgaccaggag
tacccccctttaactcaaaatagcgacttggattaa
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