Euwallacea fornicatus (polyphagous shot-hole borer): 136338974
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Entry
136338974 CDS
T10685
Symbol
CPSF2
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136338974 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136338974 (CPSF2)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136338974 (CPSF2)
U7-dependent histone pre-mRNA processing factors
136338974 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Baculo_FP_2nd
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
136338974
NCBI-ProteinID:
XP_066137949
LinkDB
All DBs
Position
1:734672..737838
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AA seq
738 aa
AA seq
DB search
MTSIIKLQVLSGAMDESPPAYLLQIDDVKILLDCGWDEKFNMKFIKEVKRHVHQIDAVLI
SYPDTAHLGALPYLVGKLGLNCPIYSTIPVYKMGQMFMYDLYQSQYNMKAFMLFNLDDVD
ATFDKIIQLKYNQSIALKGKGYGLTVTPLPAGHMIGGTIWKIMKAGEEDIIYANSFNHKK
ERHLNGCELEKLQRPSLFITDAFNASYQQARRRARDEKLMTNILQTLRSNGNVLIAVDTA
GRVLELAHMLDQLWRNKDSGLLTYSLALISNVAYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLNLCHTLQELNKVPSPKVVLASSADLEVGYSRELFLQWCSKPNNSVIITTRTS
PGTLARDLIDNNEVGRTIDLIVERRVKLEGAELREFETRQQRAKIEKITKEDGGSDSDSD
IEMSIISKGRHDIVVKQEGKVSGGFFKVTKKHHPMYPFKEEKIKCDEYGEIVRVEDYKLA
DLNPDIDDNKENLDIKEEEDDDIVEIPEVPSKCIALERTVQVNCQVQYIDFEGRSDGESL
MKILSQLRPRRVIVVHGTPENTEIIAKHCRENINVRVFTPQRGEVVDATSETHIYQVRLT
DALVSQLDFLKARDAEVAFISSQIAVRESQADAQRPSLEDDDAMEIVPDEDTRVLTLEPC
SEVDNHEPVFVNELKLYDFKQVLARANIPSEFSGGVLWCCNGTVAVRKVDTEKIVLEGCI
SDDYYKIKDLLYDQFAVL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattataaaattgcaagtcctctctggagccatggacgagtcccctcccgca
tatctcctgcaaattgatgatgttaaaattctgctcgattgcggttgggacgaaaagttt
aatatgaagtttattaaggaggtcaaaagacatgtacatcaaatagatgcagttttaata
tcatatcctgatactgcacatttaggggctctgccttacctcgtaggaaaattgggactc
aattgtcctatatattcaaccatccctgtatacaaaatgggccaaatgttcatgtatgat
ttgtatcagtcacagtacaacatgaaagcctttatgttgtttaatttggatgacgttgat
gctacttttgataagattattcagctaaagtataatcagagcattgcccttaagggtaaa
ggttatggattgactgttactcctttgccagcgggtcacatgattggggggacaatttgg
aagattatgaaggcaggagaggaggatattatttatgcaaactcatttaatcacaagaaa
gagcgccatttgaatgggtgtgaactggaaaaactgcagcggccttctttgtttatcact
gatgcttttaatgccagctaccagcaggccagacgaagggctagagatgagaaattaatg
acaaacattctacaaacattaagaagcaatgggaatgtgctgattgcagtggatactgct
ggtagagtactggaattggcccatatgttggatcagttgtggcgcaacaaagattccggc
ctattaacctactctttggcccttataagcaatgttgcatataatgtggttgaatttgcc
aagtctcaaatagaatggatgagtgataagttgatgcgtagctttgagggagccaggaac
aatccatttcagttcaaacatttaaatttgtgtcacactttacaggaattgaacaaagtg
cccagtcctaaagtagttttggcaagtagtgcagatttggaggtgggatattccagagaa
ttgtttctgcaatggtgttctaagccaaataacagtgtcattataacaacaagaacttct
ccgggaactttggccagagatctaatagacaataatgaagtgggacgtactatagattta
atagtggagagacgagtcaaactagaaggagctgaattgcgggagttcgaaacgcgacag
caaagagccaaaattgaaaaaattaccaaagaggatggcggctcagactccgacagtgac
atagagatgtcaatcatatccaaggggagacatgatatagttgttaagcaggagggaaaa
gttagcggaggtttttttaaagttactaaaaagcaccatccaatgtacccattcaaagaa
gaaaaaataaagtgtgatgaatatggagaaatagtccgagtcgaggactataagttagct
gacttaaaccctgatattgatgacaacaaagagaaccttgatataaaggaagaggaagat
gatgacattgttgagattccagaggtgccttccaaatgcatcgctctagaaaggactgtg
caggtgaattgtcaggtgcagtacattgactttgaaggtcgctcggatggggagtctcta
atgaagattctctcgcaattaaggccgaggcgagttattgtggtgcacgggactcccgaa
aacactgaaatcattgccaaacactgcagggaaaacatcaatgtgcgagtatttacgcca
caaaggggtgaagttgtagacgcaaccagtgagacgcatatttatcaagtaagacttacg
gatgccttagtttctcaattagattttctcaaagccagagatgctgaagtggcttttatc
agctcccaaattgctgttcgggaatcgcaggccgacgcccaaagaccaagtctagaggac
gacgacgcaatggaaatagtcccagacgaagatactagggttctaaccctggaaccgtgc
tcggaagtggacaatcatgagcctgtattcgtaaacgagcttaaactttacgattttaaa
caggttctggctagggccaacataccttcagagttttctgggggagttttgtggtgctgc
aatggaacagtggccgtccggaaggttgatacggagaaaatagtattggaaggctgcatt
tcagatgattattataagatcaaagacttgttgtacgatcagtttgctgttttgtga
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