Euwallacea fornicatus (polyphagous shot-hole borer): 136339726
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Entry
136339726 CDS
T10685
Symbol
SmF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136339726 (SmF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136339726 (SmF)
03041 Spliceosome [BR:
efor03041
]
136339726 (SmF)
03032 DNA replication proteins [BR:
efor03032
]
136339726 (SmF)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
136339726 (SmF)
Spliceosome [BR:
efor03041
]
Complex A
U1 snRNP components
Sm proteins
136339726 (SmF)
U2 snRNP components
136339726 (SmF)
Complex B
U1 snRNP components
136339726 (SmF)
U4/U6.U5 tri-snRNP components
136339726 (SmF)
Complex C
U2 snRNP components
136339726 (SmF)
DNA replication proteins [BR:
efor03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
136339726 (SmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
136339726
NCBI-ProteinID:
XP_066139269
LinkDB
All DBs
Position
6:complement(5230500..5231984)
Genome browser
AA seq
88 aa
AA seq
DB search
MSAAMPINPKPFLNSLTGKAVMVKLKWGHEYKGILVSVDGYMNLQLANCEEVIEGAVTGN
LGEILVRCNNVLFIRGVEEEDEEGETRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggctatgcccattaaccccaaacccttcctcaatagtttgactggcaaagcc
gttatggtaaagttaaagtggggccatgaatacaaaggcattttggtttcggttgatggg
tatatgaatttgcaactagcaaattgtgaggaggttattgaaggtgcagtaacaggaaat
ttaggagaaatccttgtcagatgtaacaatgtcctattcatacgaggcgtagaggaagaa
gatgaggaaggagaaaccagagactaa
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