Euwallacea fornicatus (polyphagous shot-hole borer): 136339790
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Entry
136339790 CDS
T10685
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03013
Nucleocytoplasmic transport
efor03015
mRNA surveillance pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136339790
09122 Translation
03013 Nucleocytoplasmic transport
136339790
03015 mRNA surveillance pathway
136339790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136339790
03041 Spliceosome [BR:
efor03041
]
136339790
03009 Ribosome biogenesis [BR:
efor03009
]
136339790
03012 Translation factors [BR:
efor03012
]
136339790
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136339790
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136339790
mRNA cycle factors
Stress granule specific factors
136339790
Spliceosome [BR:
efor03041
]
Complex C
Other components
EJC/TREX
136339790
Ribosome biogenesis [BR:
efor03009
]
Eukaryotic type
90S particles
Helicases
136339790
Translation factors [BR:
efor03012
]
Eukaryotic type
Initiation factors
eIF-4
136339790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
Cas3-like_C_2
AAA_30
UvrD-helicase
TniB
Utp25_C
Motif
Other DBs
NCBI-GeneID:
136339790
NCBI-ProteinID:
XP_066139377
LinkDB
All DBs
Position
6:3405872..3408998
Genome browser
AA seq
403 aa
AA seq
DB search
MAMVNKNRNAALEDLSNVEFETSEDVDVIDKFSNMHLKEELTRGIYAYGFEKPSAIQQRA
IKPIIKGRDVIAQAQSGTGKTATFSIAILQSIDLMVRETQVLCLSPTRELAVQIQKVILA
LGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVYDMIRRRALRTRAVKMLVLDE
ADEMLNKGFKEQIYDVYRFLPPSTQVILISATLPHEILEITTKFMTDPIRILVKRDELTL
EGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRESNFTVSAMH
GDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRS
GRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtaaataagaacagaaatgcagcccttgaagacttatcaaatgtggagttc
gaaactagcgaggatgtggatgttattgataaattctctaacatgcaccttaaagaggag
ctcacccgaggaatatatgcatatggttttgaaaaaccatcagctattcaacaaagagcc
attaaacccatcatcaaaggtagagatgtcattgctcaagcccagtcgggtacaggcaaa
acagccacattttccattgcaatcttgcaatctattgacctcatggtgcgtgaaacacaa
gtactctgtctgtcaccaaccagagaattggcagtgcagatacagaaagtaatattagct
cttggagatttcatgaatgttcaatgtcatgcctgtattggaggtacaaatctgggagaa
gatatcagaaagttggattatgggcaacatgttgtcagtggcactccaggcagagtttat
gatatgatacgtaggcgagcattacgtactagagccgtaaaaatgcttgtcctcgacgaa
gccgacgaaatgctaaataaaggcttcaaagaacaaatctacgatgtataccggttttta
ccgccgtccacacaagtcatcctcatatcagctacacttcctcacgaaatcttggaaatt
actaccaaattcatgactgatccaattcgtattttggtgaaacgtgatgagttgactctg
gaaggtataaaacaattcttcgtggccgtcgagagggaagaatggaagttcgacacactc
tgtgacttatatgatacattgaccatcactcaagcagtgattttttgtaataccaagagg
aaggtggattggttgactgaaaaaatgagggagagcaattttacagtgagtgctatgcat
ggcgatatgcctcagaaagagagagacaacattatgaaggagtttaggtcagggcagagc
cgtgttttgattactacagatgtgtgggctagaggtattgatgtccaacaagtcagtttg
gtaataaactacgatctaccaaacaatcgtgagttatatattcacaggataggtagatca
ggacgttttggacgtaagggtgtcgccatcaattttgtcaagtctgacgacatcaggatt
ctcagagacattgaacagtactattcaacacagattgatgaaatgcccatgaacgtagcc
gatcttatttaa
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