Euwallacea fornicatus (polyphagous shot-hole borer): 136339862
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Entry
136339862 CDS
T10685
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03040
Spliceosome
Brite
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136339862
Spliceosome [BR:
efor03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
136339862
Complex B
136339862
Complex C
U2 SnRNP specific factors
136339862
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NCBI-GeneID:
136339862
NCBI-ProteinID:
XP_066139521
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Position
7:3713275..3717081
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AA seq
758 aa
AA seq
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MSGFNYSHFNSKKMMNAVPPPSNLAGSSVPRNLKAVPPPSNLGTGIRHSGVPPPSSGLSK
QGYSTMTAISQNAITASWGTGSRKRAVTEDEYFDVEDEEHVPDLAYIPAPDSPTRLDLNK
KSQDEDDDEDDPLDAFMAGIEAQVKKETKQPGQSTSSVQPQDVQQPQTKQPQQAIRDDLE
EEDDEESYYRYMEENPNAGLLPVEEEGIELEYDEDGNPIPPDKKKIIDPLPPIDHSLIEY
QPFQKNFYIEHPEIKMLTKDKVAELRNMYDLKVSGTDAPKPVASFGHFGFDDKLLKTIIK
AEYSSPTPIQAQAVPAAMMGRDVLGIAQTGSGKTAAFLWPLLKHVSVQKPVEEGEGPIAL
ILAPTRELAIQIYIEAKKFAKVYDLRVICAYGGGSKWEQSNALKEGAEIVVATPGRIIDH
VKGGGTNLQRVTFLVLDEADRMFELGFEPQVRSVCNHVRPDRQTLLFSATFKKKIERLAK
DALEEPIRISQGVTGQANEDVTQHVLLMPSQDAKRDWLFGILVELLSAGSVLIFVTKKLD
AEKVARDLLVKEYDCLLLHGDMEQAERNKVITAFKKQDVPLLVATDVAARGLDIPHVRTV
INYDTARDIDTHTHRIGRTGRAGTQGTAYTLLTIKDKEFAGHIVKNLEAAKQEVPQDVLD
LALQSSWFKKQRFKKKDQSPNVGGLGLGFKELSSPLRSFVASSSGSLTNSNPPPPPKGPA
TDRLTAMKEAFKTQYMNQFTASAENPPPPPRKKKSRWE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtttcaactattcacattttaattctaagaaaatgatgaacgcggtgcctcca
cccagcaatttagcgggcagttcggtgcctagaaacttaaaggccgtacctccaccaagt
aatctggggactggaattaggcatagtggggtgcctcccccttcaagtggtttaagcaag
cagggctattcaacaatgacggcaatcagtcagaatgccattactgcttcctggggcact
ggaagccgaaaacgagcagttacagaagatgaatattttgatgtagaagatgaggaacat
gttccagatctagcatatattccagctccagatagtcccacaaggctagatttgaataaa
aagagccaagatgaagatgatgacgaagatgacccactagatgcatttatggctggcatt
gaagcacaggtaaaaaaagaaacaaagcaaccaggacaatcaacgtcatctgttcagcct
caagatgtacaacagccgcaaaccaaacaaccacagcaagcaattagggatgacttagaa
gaagaagatgatgaagaatcttactatagatacatggaagaaaaccctaatgctggtttg
ttgccagttgaagaggaaggtatagaattagaatatgatgaggatggaaatcctatacca
ccagacaagaaaaaaattattgatccactaccaccaattgatcattctttgattgagtac
caaccgtttcagaaaaatttctatattgaacatcctgaaattaaaatgttgactaaagac
aaggtcgcagaacttcgtaatatgtatgatcttaaagtcagtggaacagatgccccaaaa
ccagtagcatcatttggtcattttggctttgatgataagctattgaaaactataattaaa
gcagaatattcatcacctactcctatacaagctcaagcagtacctgcagccatgatggga
agggacgttttaggtattgctcaaactggtagtggtaaaacagcggcctttctatggcca
cttctcaaacatgtatctgttcaaaaaccagtggaagaaggagagggacctattgcgttg
attttggcaccgacgagagaattggccattcaaatttacattgaagccaagaaattcgcg
aaagtttacgacctaagggtgatttgcgcgtatggtggcggttcaaaatgggagcaaagc
aatgctctgaaagaaggtgcagaaattgttgtggccactccagggcgaattatcgaccac
gtgaagggaggaggcactaatttacaaagggtgacattcctggtgttggatgaggcagat
agaatgtttgaactaggtttcgaaccacaagtccgctctgtgtgtaatcacgtaagaccg
gataggcagacgttgctgttttcagcgacttttaaaaagaaaattgaaagattagccaaa
gatgcattagaagaaccaataagaatatcacaaggagtaacagggcaagccaacgaagat
gtaacgcaacatgtgctgcttatgcctagtcaagacgccaaaagagattggctttttggg
atattggtagagttgctatccgcggggtcggtgttgatatttgtgaccaaaaagttggat
gcagaaaaagtggcacgagatctcctggttaaagaatacgattgtttattattgcacggt
gatatggaacaagccgagagaaacaaagtcattacagcttttaagaaacaagatgttcct
cttttggtggcaaccgatgtggcggcaagagggctagacatccctcatgttcgtacagtg
ataaattatgacacagctcgagatattgatacgcacactcacagaattggacgaactgga
cgcgcaggaactcaaggcactgcttacacattgctaacgataaaagacaaagaattcgcc
ggtcatatagtgaagaatttagaggcggccaaacaggaagtccctcaagatgtgctcgat
ttagcgctacaaagctcatggtttaaaaaacagcggttcaagaagaaagaccagtctcca
aatgtaggagggctgggtttaggattcaaagaattgtcttctcctctgaggagctttgtg
gccagttcctcaggaagtttgacaaatagcaatcctcctccaccgccgaaaggacccgcg
actgacaggttgacggctatgaaggaggcttttaagacacaatatatgaatcagttcact
gcaagcgcagaaaatccaccacccccacctaggaaaaagaaaagccgatgggaataa
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