Euwallacea fornicatus (polyphagous shot-hole borer): 136339913
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Entry
136339913 CDS
T10685
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136339913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136339913
03012 Translation factors [BR:
efor03012
]
136339913
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136339913
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136339913
Translation factors [BR:
efor03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136339913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
OB_NTP_bind
HA2_N
HA2_C
nSTAND3
ResIII
AAA_22
AAA_14
ATPase
AAA_19
AAA_23
PhoH
ABC_tran
Motif
Other DBs
NCBI-GeneID:
136339913
NCBI-ProteinID:
XP_066139608
LinkDB
All DBs
Position
7:3853825..3858407
Genome browser
AA seq
1016 aa
AA seq
DB search
MHLFSLSKALLYSSLALSPNSNFQLNCKCTLKFNIATMTGRRKNWRYKPSIDRGEPRQHS
NDRGEPRRHDQRPKGLKGREIGLWYANKAKQKRDMLLEAGGEGASSVIAREEFKRQRTLE
NQERANSKPLGSILVSSSKKDNIEKLLNETSLLYPSKFSEKTTSYEHLEETDFKHEFLTH
ITGNIIEKLKSTRGAKYQYNNDYENASLLEELQRKIQSRTYQEMQKVRNKLPSMGMKDQV
IDLIEKNQIAVISGETGCGKTTQVAQFILDDYIKKGKGSQCKIVCTQPRRISAISVAERV
AAERDEKLGCSVGFQIRLEKVMPRDRGSILFCTTGVLLKFMESDPALTHVSHLILDEIHE
RDVTCDFLITVLKDVIQYRSDIKIILMSATLNSEAFSKYYDNAPHINIPGFTYPVTEFYL
EDVLQMTGYKFKEEPRKWVVAKNRRKHREWSEYIEPYIRQLEMEQKYDRNVIQELRKMKS
ESLDIPLIYELLVYICEKKADDNGTILIFVPGFADISKFCTMLRDSGRFDQFKYIIIPLH
SQLPTVDQKQIFKPAPKDMRKIIISTNIAETSITIDDVTTVIDCGYIKISNLDAETGIET
LDVELVSQANASQRKGRAGRVKPGICYHLISNIRYQLLDKFLKPEVLRKRLEDVILQLKM
LQLGEAEPFLGKLMDPPETKSVQTSLTLLQRLGALDSEENLTPLGFHMAKLPIPAQCSKM
LILAAMFSCVDPVLSVAASLGYKDAYQLSMSNDNKSNNADKMKYELSRGTNSDHICMHYA
IRGYEETHNPYSFCRKYFLSSSTLKLLKDMRKQFAEHLSEMKFISSSNPRNPGHNHNSNN
VGLIKAIIAAGLYPNIAIITKVRKGGAQLRTVNHERMEFHPKSVLQQTRSFPSPLIAYHL
RLKSSKIYVHDGTVVFPLSLVFFGDQFKIHNEENGQNGFNGVSVNENMKFLCSQSTSFAV
QKLRDRLTQILEWKIAHPGPVDWSQDSPEVKILKAIMDMIATEDGENLDLSDYDDM
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttttctctctgtctaaggccctgttgtattcttcattagctttaagtccgaac
tcaaattttcagttgaattgcaaatgcactttaaaattcaatatagccaccatgactgga
agaaggaagaactggaggtataaaccttccattgatagaggcgagccaagacaacattcc
aatgatagaggtgagccaagaaggcacgatcagagaccaaagggattgaaagggagagaa
attggactttggtatgccaacaaagcaaagcaaaagcgtgacatgctcttagaggctggg
ggagagggagccagttctgtgattgcaagagaggaatttaaaaggcagagaactttggaa
aatcaggagagagctaatagcaaacctctgggttccatattagtttcaagcagcaaaaaa
gataacatcgaaaagctactcaacgaaacttctttactgtacccttcaaaattttctgaa
aaaacaacatcttatgaacacttggaagagactgactttaagcatgaatttttaacccat
atcactggcaatattattgaaaagttaaagtccactagaggggctaagtatcaatacaac
aatgattatgaaaatgcatcgcttctggaagaactgcaaaggaagatacaaagtagaact
tatcaagaaatgcaaaaggttcgtaataagttgccatcaatgggaatgaaagatcaagtg
attgatttgatagaaaaaaaccaaattgctgtgatcagtggagaaactggctgtggcaaa
actacccaggttgctcagtttattctggatgattatatcaaaaaaggaaaaggctcccag
tgtaaaatcgtctgcactcaacccagaagaattagtgccatttcagttgctgaaagggtt
gctgcagaacgggatgaaaaactgggatgtagtgtagggttccaaatccggcttgaaaaa
gtgatgcctagagatcgaggatctattctgttttgcactactggagtattacttaaattt
atggaaagtgacccagcattgactcatgtatctcatctaattttagatgagattcatgaa
agggatgtaacatgtgatttcctaatcacagttttgaaagatgtgattcaatatcgaagt
gatattaaaataatactcatgagcgccacgttgaactcagaagcattttcgaagtattat
gacaacgctcctcatattaatattcctggctttacatatcctgtaacggagttctatcta
gaagatgttttgcaaatgactggttataaatttaaggaggagccaagaaaatgggttgtg
gcgaaaaatcgtcgcaaacatagagagtggtctgaatatattgaaccttatattcgacag
ttggaaatggagcaaaaatatgatagaaatgttattcaagagcttcgcaagatgaaaagt
gaatctttagatatcccgttaatttacgaacttttagtttatatttgcgagaagaaggca
gatgacaatggaacaatattaatttttgtaccgggctttgctgatatttccaagttctgc
accatgctaagggattcggggcgtttcgatcagtttaaatacattataattcctttacat
tcccaactaccaaccgtcgatcaaaaacaaatatttaaacccgcccccaaagatatgcgg
aaaatcattatttctaccaatatagcagagacttctattacaatcgacgacgtaaccacg
gtaatagattgcggatatattaaaatatccaatttggatgcggaaaccggaatcgagacc
ttagatgtggaattggtttcacaagccaatgcttcgcaaagaaaaggtcgcgcgggtcgc
gtgaaacctggcatttgctatcatttaatttctaacattcgataccaactgttagacaaa
tttctgaagcctgaagtgttacgcaaaaggctagaggatgtgattcttcaattgaagatg
ctgcagttaggggaagcagaaccgttcttgggaaaactaatggatcctccggaaactaag
tcggtacaaacatcgttaactctactgcaaaggctcggagcattagacagtgaagagaat
ttaacacctttaggattccatatggcgaaattgccgattcctgctcagtgttccaagatg
ttgatcttagcagcgatgttcagctgtgtagatcctgttttgtctgttgcagcatcttta
ggctataaagatgcgtatcagttaagcatgtccaatgacaataaaagtaataacgcggat
aaaatgaaatacgagttgtctagaggcaccaacagcgatcatatttgcatgcattatgcc
attcgtggatacgaagaaacccacaatccatactcgttttgtcgcaaatatttccttagt
tcttctactttaaaattactaaaagacatgcgtaagcaattcgccgaacacctttctgaa
atgaagtttattagcagttccaaccccagaaatcccggacataatcacaacagcaacaat
gtcggacttattaaagcgatcatagctgcaggattataccccaatattgccatcataaca
aaagtccgcaaaggaggggcgcaacttcgaactgtcaaccatgaaagaatggagtttcat
ccaaaatcggtgctccaacaaactagatcgttcccctcgcctttaatagcgtatcactta
cgtttaaaatccagtaagatttatgttcatgatggaactgttgtcttccccctatcgctt
gttttctttggggaccaatttaagatacataatgaggaaaacggtcaaaatggatttaat
ggagtatcagtaaatgaaaatatgaaatttttgtgtagccaatctacctcgtttgccgtg
caaaaactgcgtgatagacttacccaaattttggagtggaagatcgctcatccaggaccg
gtggattggagccaagactctcctgaagtgaaaattctgaaggcaataatggatatgatc
gcgacagaagatggtgagaatttagacctaagtgattatgatgacatgtaa
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