Euwallacea fornicatus (polyphagous shot-hole borer): 136339955
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Entry
136339955 CDS
T10685
Symbol
Top3alpha
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03440
Homologous recombination
efor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136339955 (Top3alpha)
03460 Fanconi anemia pathway
136339955 (Top3alpha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efor03032
]
136339955 (Top3alpha)
03400 DNA repair and recombination proteins [BR:
efor03400
]
136339955 (Top3alpha)
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136339955 (Top3alpha)
DNA replication proteins [BR:
efor03032
]
Eukaryotic type
DNA Topoisomerases
136339955 (Top3alpha)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136339955 (Top3alpha)
FA (Fanconi anemia) pathway
136339955 (Top3alpha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-LITAF-like
Motif
Other DBs
NCBI-GeneID:
136339955
NCBI-ProteinID:
XP_066139704
LinkDB
All DBs
Position
7:1882900..1887618
Genome browser
AA seq
1080 aa
AA seq
DB search
MGYLQNLISNLHLRRFYGTQVKATIMKYLNVAEKNDAAKNIAAILARGHSQRREGLSPYN
KIYEFTAQVFGENCQMVMTSVSGHLLNYEFGIMYRNWQSCNPLVLFDAPVTKACPKDYEK
VKKTLEREIRSCQGLIIWTDCDREGENIGYEIIKVCTDIKPQLRIYRAKFSEITSASVFR
ALNTLGQPNKNISDAVDVRQELDLRTGAAFTRLQTLRFQQVFPNKLSDKLISYGSCQFPT
LGFVVERYQAIEEFIPEAFWRIKMNHTVKELTTDFSWKRDRLFDKNSCEAILDHCKENSL
AKVESVESKPKSKWRPLPLDTVEMEKNISRKLRINAKDTMKIAEKLYTQGFISYPRTETN
IFPKELNLINLVEQQQDDNEWGLFARRILAEGGPNPRQGKKSDQAHPPIHPTKYANNLQG
NDKRVYEYIVRHFLGCVHKDAQGFETTVNVDIAGEKFTAKGLIILERNYLDVYTYEKWNA
KEINNYEQGDTFIPTVLEMAESQTSPPKLLTEADLIALMEKHGIGTDATHADHIDTIKSR
EYVGLNDIYFVPGRLGMGLVEGYNDIGLEVSLAKPTLRAEFENNLKLICEGHKDPEVVRR
EQIEKYKAVFTTVAEKMRLIDNTLSNRLGDQAQQTQDPIVNVGGRDDFRPVCKCPKCGRD
MVLRTKKDGVGKYITCTGFPDCKNSVWFPSMVKNVEVTDQHCPQCGPDCKRLRFTFRPNP
FPGDPNPNTLCICGCDENVIESLDINLVNVSRVNGARATTRNNLPVRGNFADNFNANPEP
RPAENLNQLQNRANNQHNQYESSSAPRTQTLNTFFNNSPIGSTNSGSTEGGTFRPNLDNM
PGPSGSNSNRSSFGNFTNPGDTSRRNDIVCQCDQEAILLTVKKNGPNKGLKPIYILIIIV
KFILLSSHNIGKQFYKCAQSACNFFAWNTLNDSNTTQTSNNHQNSTRMMGSVTEIQCKCN
QNAALRTVNKEGPNKGRQFYCCPNMTGGCKFFQWADEADDRGGGRGGGDDGDDHRGGGGW
GDDGGSNLNWSFKGKASRGKGKNRAAPYAKTKTGGSTGTRAKRKCGKCAQEGHTKNHCPN
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgggatatttacaaaatttaatttcaaatttgcatttacgtcgcttttacggcacgcaa
gttaaagccactataatgaaatacttaaacgtagctgagaagaatgatgctgcaaaaaat
atagctgcaattctggccagaggccactctcaaaggcgtgaaggcctatccccttataac
aaaatttacgaattcaccgctcaagtgtttggggaaaactgtcaaatggttatgacgtcg
gtgtctggccatttactcaattatgagtttggtatcatgtatcgtaactggcagagctgc
aatcctttagttttattcgacgcccctgttaccaaagcttgtcctaaagattatgaaaaa
gttaaaaaaactttagaaagagagattcgatcttgtcaaggcttaattatatggacagat
tgtgatagagaaggtgaaaatattgggtatgaaataatcaaggtttgcacagatataaag
ccacagctaaggatatacagggccaaattctcagaaataacctcagcttcagtattcagg
gctttgaatactttggggcagccaaataaaaatattagtgatgctgttgatgtcagacag
gaattggacttaaggacaggggctgcttttaccaggcttcagaccttgagatttcaacaa
gtttttcctaataaattgagcgataaactaattagttatgggtcctgccaatttcctact
ttggggtttgttgtggagagatatcaggccatagaggaatttattcctgaagctttctgg
cgcataaaaatgaatcatacagtaaaagaactgacaactgacttttcatggaaaagagat
agactatttgataagaattcatgtgaagctattttggatcattgtaaggagaactctttg
gcaaaggtagagagtgtagaaagcaaaccaaagagcaaatggcggcctctaccattagac
acagtagaaatggaaaaaaacatatcaagaaagctcagaatcaatgccaaagacacaatg
aaaattgctgaaaaactctacactcaaggttttataagttatccacgtacagaaaccaat
attttccccaaagaattaaatcttataaaccttgttgaacaacaacaagacgacaatgaa
tggggcctgtttgctaggcgaatccttgctgaaggcggcccaaatccccgacagggaaaa
aaatctgatcaggcccatcctccaatacatcctacgaaatatgcaaacaatcttcagggt
aatgataagagagtttatgaatacattgtacgacactttttggggtgtgttcataaagac
gctcaaggctttgagactaccgttaacgtggatattgcaggcgaaaaatttactgctaaa
ggcctgattattctggaaagaaactaccttgatgtttacacgtatgaaaagtggaatgct
aaagaaattaataattacgagcaaggtgacactttcattcccacagtgttagaaatggca
gaaagccagacctcacctccaaaattgctcactgaggccgaccttatagccttaatggag
aagcatggaattggtactgatgccactcatgcagatcatatagacaccatcaaatccaga
gaatatgttggactaaatgacatatattttgtacctggcagattgggcatgggtttggtg
gaagggtacaatgatataggcttggaagtttccttagccaaacctacgttacgcgcagaa
ttcgaaaacaacctaaaactaatctgtgaagggcacaaagaccctgaagtagtgagacgt
gaacaaattgaaaaatataaggccgtattcacaactgttgctgaaaaaatgcgacttata
gacaatactttatcgaatagattgggagatcaggctcagcagacgcaggatccaattgtc
aacgtgggaggaagggatgatttcagacccgtctgtaagtgccctaaatgcggtagagat
atggtgttaagaaccaagaaagatggggttgggaagtatattacttgtacaggatttccg
gactgcaaaaactcagtgtggtttcctagtatggttaaaaatgttgaagttacagaccaa
cattgcccacagtgtggcccagactgtaagcgtcttaggttcacttttcgaccaaatccc
ttcccaggggatcccaatcctaacacattatgtatatgtggctgtgacgaaaacgtaata
gaatcgttagatattaatttagttaacgtgagtagggttaatggtgcaagagctacaact
cgaaataatctcccagtgagaggtaactttgctgacaattttaatgcaaatccagaacca
cgtcctgcagagaacctgaatcaactgcaaaaccgggcaaataatcaacataatcaatat
gagtcgagcagtgcgcctcgaactcaaactttgaatactttcttcaataattcaccgata
ggaagtacaaattctggtagcactgaaggagggacttttagaccgaatttagacaacatg
cctggtccttcaggatcaaattcaaatcgaagcagctttggcaactttacaaatcctgga
gacacctctagacgtaatgacattgtttgtcagtgcgaccaagaagctattttgctaaca
gtgaaaaaaaatggccccaacaaaggtttaaaacccatatatattcttattataatagta
aaattcattttactctcttctcataacatagggaagcagttttacaagtgcgcccaatca
gcctgtaatttcttcgcttggaatacgctaaacgattccaacaccacacaaactagcaac
aaccatcaaaattctactcgtatgatgggaagtgttaccgaaattcaatgcaaatgcaat
cagaacgcggcactgcgaaccgtgaataaagagggtcccaataaagggcgacaattttat
tgctgccctaatatgacgggaggatgcaagtttttccaatgggcggatgaggctgatgac
agaggagggggtcgtggtggtggtgatgacggagacgatcacagaggaggaggtggttgg
ggtgatgatggagggagcaatttgaattggagttttaaaggtaaagcttcgaggggcaag
ggaaaaaatcgggctgcgccttatgctaaaacgaagacaggtggaagtaccggtacgagg
gctaaacgaaaatgtggaaaatgtgctcaagaaggtcacacaaagaaccactgccccaat
taa
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