Euwallacea fornicatus (polyphagous shot-hole borer): 136340097
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Entry
136340097 CDS
T10685
Symbol
Pnn
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03013
Nucleocytoplasmic transport
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136340097 (Pnn)
03015 mRNA surveillance pathway
136340097 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136340097 (Pnn)
03041 Spliceosome [BR:
efor03041
]
136340097 (Pnn)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136340097 (Pnn)
Spliceosome [BR:
efor03041
]
Complex C
Other components
EJC/TREX
136340097 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
136340097
NCBI-ProteinID:
XP_066139947
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Position
1:complement(78596..80267)
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AA seq
429 aa
AA seq
DB search
MGTEILKTFSHLQSELEEAKSSLKGVDENIKRLIGRDPSELPPRPGIKRPLDEKNGRQPF
NKFGRFEGNDRRNDAPKRRNPNAISVFDRLSDKVPDEPIAPPSKGLISKVIAAPKEIPSR
QEMLDKQNKDEKFKARNRRMFGALLGTLQRFQQEECKLKKREEKRTQIEKKIEEHEQQEK
AEIKKERQELFLNRKRKQQEIKMIELKMLRMKEYAAWEQSQKLRAHFITTKAKPQILYLP
RKMNEQTNELLEKSKIEIDEHIEKRKQAVAEELSHIEDRMKRNFEPKTNTVESKVEKSSD
RHNRRGSDSEMDDDEEETKEKSQSPEPEEPQEKKDEEEIAVVTEENVEQVTLVHEINGGI
EEAKKEQSDEQDNLQVMTPNNSDIVDSDGGVLMKSITETNVVINGDNIEVTNEVAVTEDE
LQEHQEEDI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgaaatcctaaagactttcagccaccttcagagtgaactggaggaggctaaa
agcagcctcaaaggtgtagatgagaacataaaacgcctcataggacgagaccctagcgaa
ttaccgcctcgcccaggcatcaaacgacctctagacgagaaaaacggtcgtcaacccttc
aacaaatttggcagatttgaggggaatgatcgaaggaatgatgctcctaagcgtagaaac
cccaacgctatttctgtgtttgaccgtctttctgacaaagttccagatgagccaattgcg
cccccttcgaaggggcttatcagtaaggtaattgcagctcccaaggaaattcctagtcgt
caggaaatgttggataagcaaaataaggatgagaaattcaaagcaaggaatcgaagaatg
tttggggcgttactagggactttgcaaaggttccaacaagaagaatgtaagcttaaaaaa
agagaagaaaagcggactcaaattgaaaaaaaaattgaggaacatgagcagcaagagaag
gcagaaattaagaaggagagacaggaattgtttttgaacagaaagaggaaacagcaggaa
attaagatgattgagttgaagatgttaaggatgaaggagtatgcagcttgggagcaatca
caaaaactcagggctcacttcatcaccactaaagcaaaaccacaaattctctatctcccc
aggaaaatgaatgaacaaacaaatgaattgctagaaaaatctaaaattgaaattgatgag
cacattgagaaaagaaagcaggcagtggcagaggaattgagccacattgaggatcgcatg
aaacgaaattttgaacccaaaaccaatactgtagaatcaaaagtggaaaaatccagtgac
agacataatagacgaggcagtgacagcgaaatggatgatgatgaagaagaaacaaaggag
aaatctcaatctcctgagcccgaggaaccacaggaaaagaaagatgaagaagaaattgct
gtggtgactgaggaaaatgtggaacaagtgactttggtacatgaaatcaatggtggtatt
gaagaagctaaaaaggagcaaagtgatgaacaagataacttacaagtgatgaccccaaat
aactctgatattgttgactcagatggaggtgttttaatgaaatcaataactgagacaaat
gtggttattaatggtgataatattgaagttacaaatgaagttgctgttactgaagatgaa
ctgcaagaacaccaggaggaagatatttga
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