KEGG   Euwallacea fornicatus (polyphagous shot-hole borer): 136340449
Entry
136340449         CDS       T10685                                 
Symbol
LSm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
efor  Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018  RNA degradation
efor03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:efor00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    136340449 (LSm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    136340449 (LSm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:efor03019]
    136340449 (LSm7)
   03041 Spliceosome [BR:efor03041]
    136340449 (LSm7)
Messenger RNA biogenesis [BR:efor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     136340449 (LSm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     136340449 (LSm7)
Spliceosome [BR:efor03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    136340449 (LSm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 136340449
NCBI-ProteinID: XP_066140679
LinkDB
Position
7:complement(5272135..5272813)
AA seq 113 aa
MASGEDKRKSANASQDQKEKKRKESILDLSKYLEKTIRVKFAGGREASGILKGYDPLLNL
VLDNTLEYLRDPDDPFKLTEDTRELGLVVCRGTSVVLICPMDGMESIPNPFIS
NT seq 342 nt   +upstreamnt  +downstreamnt
atggcctctggagaggacaaaagaaagtccgcgaatgccagccaagaccagaaggaaaag
aaacggaaagagtctattttagacctgtccaagtatctggagaaaaccatcagagttaaa
tttgctgggggcagagaagccagtgggatacttaagggttatgacccactcctgaatctt
gtcctagacaatacactggagtatctcagggatcctgatgatccttttaagttgactgaa
gacaccagagaattggggctcgttgtttgcagagggactagtgtagtgcttatttgccca
atggacggaatggagtctattccaaatccttttatttcatag

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