Euwallacea fornicatus (polyphagous shot-hole borer): 136341113
Help
Entry
136341113 CDS
T10685
Symbol
Msh6
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136341113 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efor03400
]
136341113 (Msh6)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136341113 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
136341113
NCBI-ProteinID:
XP_066141842
LinkDB
All DBs
Position
9:complement(2425724..2436105)
Genome browser
AA seq
1147 aa
AA seq
DB search
MSRNQKPVSAQKNTLFKYFSSPKTPTTLKNSETSSPCLVKEAKSSPGSTTSGCGTPSIHK
NKETKLDIKNDDSGDELQITKSIKRRRIALLDSDSEPENESPNKKKSPKEKNPPAKRHRI
QPQSSDCESEEEIPIPPKKKMQESDVAENSEHKSFVGSFSYSTREEKSEIEFGNNSKTGK
VKTKPVAETNIDSGWLHNTLDFLKPEKIRDAEKRRPSEPDYDSRTLHVPESYLNSLTPAM
RQWWILKSQHMDSVLFFKVGKFYELYHMDAVIGVQQLGFSYMKGDFAHSGFPEGGYSKMA
TMLIDKGFRVARVEQTETPEMMAERCKTMKKTTKFDKVVSREICQVTTKASCVYGAQMPE
ARSEMGNYLCAIAVKANPDNTSRLGICFTETSIGTFYLSEFDDDKHCSKLLTLFAEYPPY
LILIERGVNYGHLKYLLNTQLKDIKQEVLAAKTQFYEAATTLETLFSACYFKTKDGKFEW
PKLFEDVAEDCNPKSEYELALKSLGAIHWFLKRSFLDIQLFSMGLFEKYEPVDSQAVPLN
KHIERDYMVLDSTALQSLSLLGGQGTLQKTIDFCKTPFGKRLLPQFICRPLCNLDKIKLR
QGAVKELNENPQKLQSCQEILKKLPDLERQVAKIHTYGNKFCVTSHPDGRAILYETKTYS
KRKILDLLNTLRGFEASQEINIIFKDCESRLLRKLTQFEPTGMNIDLTETLTFFKQAFNH
EAAEKEGKIIPKRGVEHDFDEAEDQIEEINEQLKQYLKQQSTFFGCQVSYFGTDKKRFQL
EVPEHRASKADGKYQLEGHKKGAKPAKRFSTPRSRELLQDMLKAEAERNKIILDLNRRIF
EKFSLEYNKWQQVIHCLALLDVICSLAEYASTFSGDICLPNIHGFSTKPFISIDNGKNPC
VMNIETFVPNDTYMGAKDKAPLLLLTGPNMGGKSTLMRQVSVICIMAQMGSFVPASQCSF
SMVDRVFTRLGACDDIVRGHSTFFVELSEASAILRHASKQSLLIIDELGRGTSTHDGNAI
ATAYLKRLTQTACRTLFSTHYHSLVDQFVNNAQVQLGHMACMVENEDDESEESVTLLYKL
SEGRCPKSFGFNAAKLAGLSAKVVARAREISKQIEIEDKCRNVFRKVFASDELGVDEVIA
MVRTLEV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatcagaaaccagtttcagcccaaaagaataccttgtttaaatattttagt
tcacctaaaacaccaacaactttaaaaaattcagagacatcatcaccatgtttagttaaa
gaggctaaatcaagtcctggaagtaccacctctggctgtggcaccccctcaattcacaaa
aataaagaaacaaaacttgatattaagaatgatgatagtggtgacgagcttcaaattacc
aagtctatcaaacgtcgccgcatcgcccttctagacagcgattctgagcctgagaatgaa
tctcccaacaaaaaaaaatctccaaaggaaaaaaatcctccagccaagcgacatagaata
caacctcagtcatctgactgtgaatctgaagaggaaattcccattcctccaaagaaaaaa
atgcaggagtcagatgttgcagagaactcagaacataagtcttttgtggggtcatttagt
tattcaacgagggaggaaaagagtgaaattgaatttggaaataatagtaaaactggaaag
gtgaaaactaaacctgtagctgaaacaaatatagattcaggttggcttcacaataccttg
gattttctaaaaccagagaagataagagatgctgaaaagaggagaccttctgaaccagat
tatgattcaagaacacttcatgtacctgaaagttatttaaattctctcactcctgctatg
aggcagtggtggatattaaaaagtcaacatatggattcagttttgttctttaaagtaggg
aagttttacgaattgtatcacatggatgctgtaattggggtgcaacaacttggtttctct
tatatgaagggagattttgcccattctgggtttccagaaggtggttactctaaaatggca
accatgctcattgacaaagggtttagggtagctcgggttgagcagactgaaacaccagaa
atgatggcagaaagatgtaagacaatgaaaaaaacaactaaattcgataaagtagtgtct
cgtgaaatatgtcaagtaacaacaaaagcatcatgtgtgtatggggcacaaatgccggaa
gctcggtcggaaatgggaaattatttatgtgcaattgcagtcaaggcgaatcccgataat
acaagcagattaggcatatgttttactgagacttcaattgggactttttatttatcggaa
tttgatgacgataaacactgttcaaaattgttaactttgtttgcagaatatcccccatat
ttgatattaattgaacgaggagtaaattacggtcatttgaaatatttattaaacacccaa
ttaaaagatattaaacaagaggttcttgctgctaaaacccaattttatgaagctgcaaca
acattggaaactctattttctgcttgttatttcaaaacaaaagacgggaaatttgagtgg
cccaagttgtttgaggatgtcgccgaagactgtaatcctaaatcggaatatgaactagct
ctaaaatcattaggagcaattcactggttcttgaagcgctctttcttggacattcagtta
ttttcaatgggcttatttgaaaagtatgaaccagtagactcacaagctgtaccgttaaat
aaacatatagaacgtgattatatggtgttagattctactgctctccagagtcttagttta
ctaggaggacagggaactctacaaaagacgatagatttttgcaagactccatttggaaaa
aggttgttgccgcaatttatttgtcgtcccctctgcaacttggataaaattaaacttaga
cagggagcggttaaagaactgaatgaaaatccacaaaaattgcaatcttgccaagaaatt
ttgaaaaagttaccggatttagagcgacaagtggcaaaaattcatacctatggcaataaa
ttttgcgttacttcccatccggatggaagagcgattttatacgaaaccaaaacttattct
aagcgtaaaatacttgatttgctgaataccttaagggggtttgaggcttcacaagaaata
aatattatatttaaagattgcgagtctcgattattacgtaaactaacacaatttgagcct
actggcatgaacattgatttgaccgaaacgctaacgtttttcaagcaagcatttaatcat
gaggccgctgagaaagaaggaaaaattattcctaaacgaggtgtcgaacatgacttcgat
gaagcagaggatcaaatagaagaaataaacgaacagctaaaacagtatttaaagcaacag
tcgaccttctttgggtgccaagtttcgtatttcgggactgataagaaaagatttcaatta
gaagttcctgaacacagagccagtaaagctgatggcaaatatcaactcgaaggccataaa
aaaggagccaaacctgcaaagcggttctcaactcccagatcaagggagttgttacaagat
atgcttaaagctgaagcagaacgaaacaaaataattttagacttgaatagaaggatattt
gaaaaattcagtcttgagtacaataaatggcaacaagtaatacattgcttagctttgtta
gatgtaatttgttccttagctgaatacgcctcaacgttttctggagatatttgtttacct
aatattcacggcttctcaactaagccctttatttccattgataatgggaaaaatccctgc
gtcatgaatattgaaacattcgttccaaacgatacctacatgggtgcaaaagataaggca
cctttgctgcttttaactggcccgaatatgggcggtaaatctactctaatgcgccaagta
tccgtcatttgtataatggcacagatgggaagttttgttcctgcttcccagtgttccttc
agcatggttgacagggtgttcaccagattgggtgcttgcgatgatatagtcagaggtcat
tcaacgttctttgtggagttgagcgaagcatctgcgattttgcggcacgcttcgaagcag
tcattactgattattgacgaacttggcagaggcacttcaactcatgatggaaacgccata
gctacagcatacttgaagcgacttacgcagacggcatgtaggacattattttcgacacat
tatcacagcttagtcgatcaatttgtcaataacgcgcaagtacagctaggtcacatggct
tgtatggtggagaacgaagacgatgaatcagaggaatccgttactttactctacaaacta
tctgaaggtcgttgcccgaaatctttcggctttaatgcggcaaaactagccggattatca
gcaaaggtcgtagcgagagcccgagaaatctccaagcaaatcgaaattgaggataaatgt
aggaatgttttcagaaaggtattcgccagcgacgaacttggagtggatgaggttattgca
atggtcagaactttagaggtataa
DBGET
integrated database retrieval system
