Euwallacea fornicatus (polyphagous shot-hole borer): 136341273
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Entry
136341273 CDS
T10685
Symbol
Mp
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
Exosome [BR:
efor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136341273 (Mp)
Proteoglycans [BR:
efor00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
136341273 (Mp)
Glycosaminoglycan binding proteins [BR:
efor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136341273 (Mp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136341273
NCBI-ProteinID:
XP_066142160
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Position
9:complement(4303270..4573177)
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AA seq
1178 aa
AA seq
DB search
MVLSLRISRALPVVIVWLFLTPSTGEEDSFELPASFTQGESPKVFEYNLLDAVTIPLQDH
KTQYVGESEDGFPAFGFRVGSDVKMAYKQILPDTLSEEFAVLINAKPETKNGGFIFAIVN
SLETIVELGVRIAPENGSSTVLSLYYTDVASEVASHALANFTVPKFSNRWTRFAFGITMD
DVTLFFNCSQAGTVQVNRAPMKLGFESASTLYLAQAGPLIGGAFEGTLSHVKIYADPGMA
AQQCKTDFQDFMDLQGDDIDGNNLDMKESTEDNEISQDVNYFVERTDYPPFPREDVDGLG
TFPPPPPPPDGKACPCGGLEDCCNFLFNDLHAAGKYKGEKGDRGAKGPPGEAIRGPPGPP
GPPGLPGPAAPEGSCPCNVTTLLSAMGIPFPYSPAIEKEGLPGVPGSPGRPGERGLPGPR
GDKGERGERGPPGPPGPPGGRGDEGKEGSPGPPGPPGPSGPPGPTEIDGVNVGDLKKGSS
GVPIIRPGIPGSKGEPGHTGEKGAKGDKGPAGPKGGGGAKGERGDRGLPGERGPNGQKGD
SGTDGFPGTPGTPGHKGEPGVPGTPGLPGVLTTNGSTAVIDGQPGPPGVDGLPGTKGETG
EKGARGPVGSQGLPGEKGVPGTDGALGPVGPPGSKGEKGERGPPGDIYLHRVGQADHKIT
PIKGEKGDLGRRGRRGKPGPPGPPGMIGKGAEGSAQGWTGRPGPTGPSGPLGPKGEKGDS
WGGGSGLKGEKGDKGERGSDGKDGQPGRDSESRIIAMPGPPGPPGPPGLPGLSITGPKGE
PGESIFSEPLFNIRPGAQSNMEELRAVQELTDLKDLRTEAAGRSTAAPPIAHAVTQKKTE
TPMSGAMAFKSRNMMLEATKGSPIGTMVYIIEEESLLVRVNAGWQYVALGALLHTVPSPG
AVPSTRAPPLVHHPFESSNLVTQDVLSKTSNQIPQLPRLPEIMPHKVHATSRPEFHVRPG
QSPEEAKATQFATLRIAALNEPYSGNAGGVRGADYDCYREAHRAGLKGTFRAFLSSRAQD
VSSIVRQVDRVLPVSNLRGEVLFDSWMDIFEGRGAPFSHQPRIFSFNGKNVMTDPHWPIK
SAWHGALLDGTRALDTSCEAWHTSHYGKVGLAGNLKGQMLLDQNPMPCDKKLILLCVEAT
SEIFVQRRRRSTMENDNRHINDSLMSEHQYHQFLDSIH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtgctttccctcaggataagtcgtgctctgccagtggtcatcgtttggctattcttg
acaccatcaactggagaggaagattcgttcgaactgccagcatcatttacacagggtgaa
agcccaaaagtcttcgagtacaatctcctcgatgccgtcaccatccctcttcaagaccac
aaaacgcaatatgtaggcgagagtgaagatgggtttccagctttcggttttcgagtgggg
tccgacgtgaaaatggcctacaagcagattcttcctgataccttgagcgaagaatttgca
gttctcatcaatgccaagccagaaacaaagaacggaggcttcatattcgctattgtgaat
tccctggagactattgtggagcttggtgtgagaatagctccagagaatgggtcgtcgact
gtcctctctctctattataccgatgtggccagcgaggtagcttcacacgctctcgctaac
ttcacagtaccgaagttctccaatagatggactagattcgccttcggcattacgatggat
gacgtcaccttattcttcaattgcagccaagccggcactgtccaagttaaccgagcaccc
atgaagcttggctttgagtctgcgtcgacgctgtacttggcgcaagccgggcctctgatt
ggcggagctttcgagggtacattatcgcacgtgaaaatatatgcagatccaggtatggca
gcgcaacaatgcaaaacggattttcaggattttatggatttgcaaggagatgacatagat
ggtaataatttagatatgaaagaatccaccgaagacaacgaaattagccaggatgtaaat
tattttgtggagaggacagattaccccccgttccccagagaggacgtcgacggtttgggg
acatttccgcccccaccgccgcctccagacggtaaggcttgtccttgtggcggcctcgag
gattgctgtaatttcctttttaatgatttacatgcagcgggaaaatataaaggagagaaa
ggagatcgtggggccaagggaccaccgggtgaagcaataagaggacccccaggaccacca
ggtcctccgggcttacctggacctgcagcccctgagggttcttgtccatgcaatgtgaca
acgcttctcagcgcaatgggaatacctttcccgtactccccagcgatagaaaaggaaggg
ctgcctggggttccagggtcaccagggcggcctggagaaagagggctacctggtcccagg
ggcgataaaggagaaaggggtgaaagaggtcctccgggccctccaggcccacctggaggc
agaggagacgaaggtaaagagggatctcctggcccaccagggccaccagggcccagtggc
cctccggggcctaccgaaatagacggagttaatgtgggagacctcaaaaagggttcttcg
ggtgttccaatcatccgtccaggaatacctggaagtaaaggggagccgggacatacaggg
gaaaagggcgctaagggggacaaaggccctgccgggccgaaaggaggaggaggcgctaaa
ggtgaaagaggagatagaggattgcctggggaaagagggcctaatggccaaaaaggagat
tctgggaccgacgggtttcctggcacgccgggcactccaggacacaaaggcgagcctgga
gtaccgggcacgcccggtttgcctggagtgctaactaccaatggcagcaccgccgtcatc
gatggtcagccgggtcctccgggggtcgacggacttcctggcactaaaggtgaaactggg
gaaaaaggtgctagaggaccagtgggctctcaaggattgcctggtgagaaaggagtacct
ggtactgatggcgctctgggtcccgtggggccccccggttctaaaggcgaaaagggagaa
cgtggacctccaggggatatttacttacacagagtgggacaggcagatcataaaattact
ccgataaagggtgaaaaaggcgatttgggacgacgaggacgacgaggcaagcccggacct
cccggtccaccggggatgataggcaagggtgcagaggggagtgcacaaggatggacgggt
aggccaggaccaactggaccgtcaggcccgctagggcccaaaggtgaaaaaggagattcc
tggggtggtggatctggccttaaaggtgagaaaggcgataagggagaacgaggaagtgat
ggcaaagacggacagcctgggagagactccgaaagcagaattattgcaatgcctggacct
cctggtccaccaggaccgccaggattgccggggttgtccattactggaccgaagggcgaa
cctggtgaatcaattttcagtgaacctctcttcaatatacgaccaggagcccaaagcaac
atggaggaacttagagcagtgcaggaattaaccgacttaaaggatctgagaacggaagca
gcaggtcgttccacggcagccccgcctatagcacatgctgtgacgcaaaaaaagaccgag
actcctatgtctggagcaatggcattcaaatctaggaatatgatgcttgaggcgacaaag
gggagccctattgggacaatggtatacattattgaggaggaatccttgttagttcgggtg
aatgcgggatggcagtatgtcgcgttgggagcgctattacatacagttccgtcgccggga
gcagtaccatctaccagagcaccgcctctggtgcatcatccattcgagtcgagcaacctt
gttacacaggatgttttgtcgaaaacatccaatcaaatacctcagctacctcgactgcca
gaaattatgccccacaaggtgcatgcgacttcgaggccagagttccacgtgagacctgga
cagtcaccagaagaagctaaggctactcagtttgcaacgttacgaatagctgcactcaac
gaaccatattctgggaacgcgggaggggtgcggggagcggattatgactgttaccgagag
gcccatcgagccggactaaaaggcactttcagagcattcctttcatcgcgagcacaagat
gtcagctcaatcgtcaggcaagtggaccgagtactaccagtcagcaacctcagaggtgag
gtactattcgattcgtggatggatatattcgaaggaagaggagcaccgttctcccaccaa
cccagaattttctcatttaacggtaaaaacgtgatgaccgacccccactggccaatcaaa
tcggcctggcatggggccctgctggacggtaccagagcattggatacgtcatgcgaagcc
tggcacacatcgcactatggcaaagtagggctggcggggaaccttaaagggcagatgttg
ctggatcaaaatccgatgccctgcgacaagaagctaatcctcctctgtgtagaggcaacc
agcgaaatatttgttcaaaggagacgaaggagtacgatggagaacgacaatagacacatc
aatgacagcctgatgtcagagcatcaatatcaccaattcctcgactcaattcactaa
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