Euwallacea fornicatus (polyphagous shot-hole borer): 136341277
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Entry
136341277 CDS
T10685
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efor03041
]
136341277
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136341277
Spliceosome [BR:
efor03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
136341277
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
AAA_30
Bac_DnaA
Motif
Other DBs
NCBI-GeneID:
136341277
NCBI-ProteinID:
XP_066142176
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All DBs
Position
9:4762175..4773560
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AA seq
780 aa
AA seq
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MATIQVKLKMNEPKALGQSFTSKERTKDVLLTEKLPFSSMLLPPNILRGLGASGFERASP
IQLKALPVGRCGFDLIVKSKSGTGKTLVFSVITLESIKLEKQAPQVLILAPTREIAVQVQ
EVIQSIGTFFEGLSVNCFIGGLSLELDKEKCKSCHIAVGTPGRVRQLIEQGSLKIDSIKL
FVLDEADKLIEESFQNDITKIYNTLPDKKQIIMCSATYPEAVKTFLELYLRCPVVISAEE
DTPLLLGLKQFVRLLELPSNVVQQIKAKNDELLKLMSSVPFVQCIVFSNYQSRAESISNF
LNRNGWKSVFISSAQKQSERLKYMSDLKDFKLKILVTTDLIARGIDVPDVNLVINYDIPL
DACTYLHRMGRAGRFGSIGNCINITFNGKEAELLQNILGYIGGESLSIPVVDEKYQFEKE
VTHLYGKWQDSSNYDKEIQEIRKSLTDSRPKKESSKKQSKKLAKEKEDSNQLVEESLNED
MSLILNNQTSEKSEIGELNAVELLEQFINVPSCKSPQKPRSAEQVVNKNKVLIDIARILS
GDEVSDLNMSHCFKSQETVNTEYSKDCKSDFPELLENIFAIAYRSQIDSTATPWQELLPD
SEKPKLSENYQKDISDDNFCDDEDYQEADDCEYDEDYDFEVEKEIEVTYDTATVAPAPAK
TYGFMEWIPVEPGQEVLTKKPKKSKFYAKKEMVSKITVEEQPIFNSSYAVVPKDTASYHQ
EYQKYFQHCSGNLWQNGLMFSNVESFDWWFHCDWERQLSAVRNFVQNKIYCNEMSHYQKS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggccacaatacaggtgaaactaaaaatgaacgaacctaaagctttgggccaatcgttc
acgtcaaaagaacgcaccaaagacgttcttctaactgaaaagttgccattttcatcaatg
ctcttacctccaaatatcctaagaggcctaggagcttcggggtttgaacgcgcctctccc
atccaactgaaggctttgccagtaggaagatgtggatttgacctaatagtcaaatccaag
tcaggtacaggaaagaccttagtcttttctgttatcactctggaatccattaaactggaa
aagcaggcacctcaagttcttattttagcacctactcgtgaaatagcagtacaagtacaa
gaagtcatacaaagcattggaacattttttgaaggtctatcagtcaactgctttattgga
ggtctttcattggaacttgacaaggaaaaatgcaagtcctgccatattgccgtaggtact
cctggtcgagtgcggcagttaattgaacaaggcagtctcaaaatagactcaattaaactg
tttgttctagatgaggctgataagctaattgaagaaagcttccagaatgatataactaag
atttataatactctgcctgataaaaagcaaattataatgtgcagcgccacgtacccggag
gcagtaaagacgttccttgagctctatttgcgttgtccggtggttatttccgcggaagaa
gacactcctctgttattagggcttaagcagtttgttagacttttggaactgccctcgaat
gtagtgcaacagattaaagcaaagaacgatgaattattgaagttaatgtcttctgtgcca
tttgtgcagtgtatagtattttctaactatcaatcgagagcagagagtataagcaacttc
ctgaaccggaatgggtggaaatcggtgtttatatcttcggcgcaaaaacagtctgaacgc
ctcaaatacatgagcgatttgaaagattttaaattgaagatattagtaactaccgactta
atagcacgcggaattgacgtgcctgacgtgaatttagtaatcaactacgatattccttta
gacgcctgcacgtatttgcaccgaatgggacgtgctggtcgattcggatcaattggtaac
tgcattaacatcacttttaatggcaaagaggctgaattgttgcaaaatattcttggttat
attggaggtgaaagcttatcaatcccagttgtggacgagaaatatcaatttgaaaaggag
gttactcatctatacggaaaatggcaagattcgagtaattatgacaaggaaatccaggaa
attcgcaaatcgttaaccgatagtcgtcccaagaaagaatcgagcaaaaaacaatccaaa
aagctggccaaagagaaagaagattcaaatcaacttgttgaagagagtttaaatgaagat
atgtctttaattcttaataatcagacttctgaaaaaagtgaaattggtgagttaaatgcg
gtagagctgttggaacaattcattaatgtccccagctgcaagtcacctcagaagcccaga
agtgcagaacaagttgttaataagaataaggttctaattgacattgctagaattctaagc
ggtgacgaagtgagtgacctcaatatgtcgcattgcttcaagtcacaggaaactgttaac
acggagtattcaaaagactgcaagtcagatttcccagaactattagaaaatatatttgct
atagcttatcgatcacaaattgattctacggcgaccccatggcaagagttgcttcctgat
tcagaaaaacctaaactttccgaaaattatcaaaaagatataagtgatgataatttttgc
gatgacgaagattatcaagaagctgatgactgcgagtatgatgaggactatgactttgaa
gtagagaaggaaattgaagtgacttatgatactgcaactgtcgcccctgctcctgcaaaa
acctacggcttcatggagtggatacccgtggagcctggtcaagaggtgctaaccaaaaaa
ccgaaaaagtccaaattctatgcaaaaaaagagatggtttccaaaataaccgttgaggag
caaccaatttttaatagttcatacgcggtagttcccaaggacacggcgtcttatcaccaa
gagtaccaaaagtattttcagcattgcagcggtaatttgtggcagaatggtttgatgttt
agtaacgtagaaagtttcgattggtggttccattgcgattgggaaagacagttgagtgca
gttaggaatttcgttcaaaacaaaatatattgtaatgaaatgtcacattaccagaaaagc
tga
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