Euwallacea fornicatus (polyphagous shot-hole borer): 136341627
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Entry
136341627 CDS
T10685
Name
(RefSeq) embryonic polyadenylate-binding protein-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03015
mRNA surveillance pathway
efor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136341627
09123 Folding, sorting and degradation
03018 RNA degradation
136341627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136341627
03041 Spliceosome [BR:
efor03041
]
136341627
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
136341627
mRNA cycle factors
Stress granule specific factors
136341627
Spliceosome [BR:
efor03041
]
Complex C
Other components
Complex C specific factors
136341627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
Nup35_RRM_2
POP1_C
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
136341627
NCBI-ProteinID:
XP_066142899
LinkDB
All DBs
Position
10:complement(3880952..3884857)
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AA seq
570 aa
AA seq
DB search
MFPMGSLYVGDLHPDVTEAMLYDKFSSAGQVLSLRICRDFRTKQSLSYGYVNFNSPRDAE
TALDTMNFDHLKGKPIRIMWCQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGSIL
SCKVALDEDGYSKGYGFVHFESEDIANRAIEKVNGMLLNEKRVYVGKFIPRSEREKKLGD
RVKQFTNIYVKNFGQHMLDEEFYGIFSKFGTVTSSMVARNQDGTSKGFGFVAFEDANSAE
KAAREMNGKEYDNRTLYVGRAQKKSERMNELRKKYEQQRMERFNKFQGLNLYIKNLDDSF
TDDKLKAEFECFGKITSAKVMTENGRSRGFGFVCFSATEEANKAIHNMNAKIVGTKPLYV
ALAQRKEARRAFLTSQYVARAHAARQQGLQLPGGPPFLLPAVAQGPRIFGPAPALRAAPR
WPSLQPLSRPNGASFELPLLGAAPFRAPSRPASIRVHARPITGVTVHTARPNSKYTTRHG
PETFIADSRIVHAAPQEQKQLLGEQLFRIVEKLHPELAGKITGMLLEIDNSELVHMIKNQ
ESLMAKVEEAIAVLEAHKVNKKGITVQDKA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccatggggtccctgtatgtgggggacttgcaccctgatgtcacggaggctatg
ctgtatgacaagttttcttcagcggggcaggttctatcgcttcgaatctgtcgcgatttc
cgcacaaaacaatctctcagttacggctatgtgaacttcaacagtcctcgtgatgcagaa
accgcgctagacaccatgaattttgatcacttaaaagggaagcccattagaatcatgtgg
tgtcagcgggatccctctctgagaaagtctggagtcgggaacgttttcatcaagaacctg
gacaaaaacattgataataaggccatgtacgacacgttctcggcattcgggagcattctc
agctgcaaggtagctttggacgaagacggttattccaaaggatacggctttgttcacttt
gagagtgaagatatcgctaatcgggctatagaaaaggtgaatggaatgcttttaaatgag
aagagggtgtatgtgggtaaatttatcccgcgatctgaaagggagaaaaagttgggggac
cgagtcaagcaatttacaaacatttacgtcaaaaacttcgggcagcacatgttggatgag
gaattttacggaattttttcaaagtttggaacggtcacaagcagcatggtggcgaggaac
caggatgggactagcaaagggtttgggtttgtcgctttcgaagatgctaattcggccgaa
aaagctgcacgagaaatgaacggtaaagagtatgacaatcggacactctatgtgggacgc
gctcaaaagaagtcggagcgcatgaacgagctgcgaaagaaatacgagcagcagagaatg
gagagattcaacaaattccaaggtcttaatctctatatcaaaaacctggatgactctttt
accgacgacaagttgaaggccgaatttgagtgtttcggcaaaatcacctctgccaaggtg
atgactgagaatgggcgatctcgaggatttgggtttgtatgtttctctgccacagaagag
gcaaacaaggccatacataacatgaacgctaaaatagtaggcacaaagccgctctacgtt
gctttagctcaacgcaaagaggctagaagagcattcctcactagccaatatgttgctaga
gctcatgcagccagacaacagggtttgcaattgccaggtggtcctcctttcttgcttcca
gcggtggcgcaaggtccacgtatatttggtcctgcgcctgcattgagggcggcaccacga
tggccctctttgcagcctttgtcccgaccaaatggagcctctttcgagctgccactgctt
ggtgctgcgccctttcgagcgccttcgcggcctgcttctataagagtgcacgctcgacct
ataaccggtgtgacggtacatacagcgcgtccaaactccaagtacacaactcgccatggc
ccggagacttttattgctgattcgagaatcgtgcatgcggctccacaggaacaaaagcaa
cttttaggggaacaattgttccgaattgtggagaaacttcatccagagttggcaggaaag
atcacaggaatgctgctggaaattgacaattccgaactggtgcatatgattaagaatcag
gaatctttgatggcaaaggttgaagaagcaatagcggtacttgaagctcacaaagtgaac
aagaaagggataacagtgcaagacaaagcatga
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