Euwallacea fornicatus (polyphagous shot-hole borer): 136342233
Help
Entry
136342233 CDS
T10685
Name
(RefSeq) NPC intracellular cholesterol transporter 1 homolog 1b-like
KO
K12385
Niemann-Pick C1 protein
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
efor04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
136342233
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
136342233
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
efor02000
]
136342233
Transporters [BR:
efor02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
136342233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
Sterol-sensing
NPC1_N
Patched
Motif
Other DBs
NCBI-GeneID:
136342233
NCBI-ProteinID:
XP_066143924
LinkDB
All DBs
Position
11:4757788..4775028
Genome browser
AA seq
1244 aa
AA seq
DB search
MNAVFYLLCLLCFSLATGYTAEKREPKCHFLHVCNHDPKDRDQNCVEVTPPERLNLTDPE
ANATNTQIREYCPFLYEGTDKKVDDNPALCCDLDQMKLTINGFEKSAPFSRCPTCIKNIQ
RFFCLVSCSPYQYYMTSSYKSERNESTGVEYVTEVHLFSKNETLTEIYNSCKDVSLPSTG
ERVLQSACGNYGAIWCTPKRWFEFMNDPDQNIFSPFKILYEDDINGTSPLNFDVPSCQEA
YENSSACSCSDCPVNCPLIPFVSISSDETLFWNINKYSFYVSVGLFLLGSVGLVVGLVLS
RFITSITPDVPQRAKGKFAKIQENIHKYLYKFFKAWGYLIAKRWGIVLLTTSVIVAAASS
GIYHLNVTTDPIELWASPTSRSRQEKEFFDTNFSPFYRTNQIFIKTVSMSSFYFNSTYGG
NIILGPAFNDTFLEEVFKLQQKIEAITVKVDGRTIGLKDICYSPLRTPFYGSRSIDECTV
ISLLGLFSNNLNSFKSDIQSSTEKIIGCLQAPTGLNCLAPYGGPVMPGVAMGGTTQDDHL
DAVGVSLTFILNNNKNKSELAGTFAWEKKFIEFMKSWDGSKDKPSFMNVAFSAERSIQDE
IERQSSSEMITVIISYLVMFSYIAISLGKITRFKGILLESKLMLGTGGIVIVFSSVTAAI
GLCSYIGITTTMLTLEVIPFLVLAVGVDNIFIMVQTYQRSPGRPGQSVAECIGDMLGKVG
PSMLLTGISEIMCFAIGSLSSMPAVQTFAVYATIAVALDFLLQITAFLALFALDQMRYRA
LRLDVLFCIKLNYFENSDKPSIIHKFWKKKFTPLIMKFPIRVIVMILFLISTCACIAIAP
SIELGLEQQLSMPKDSHVLKYFKFLNNLLGTGPPLYWVITGNVDFSNKTLKNRFCSGVGC
NEDSIVTQLYLASKMENITYISSQSNSWIDDFYDWAAAEKCCKFFNSNSSFCPHTYTTDL
CESCDYATLSRKDPKMNEATYYLNYLPYFLMDNPDAVCAKGGHAAYYQGIAFSNDNSGKT
SVATSSIMSYHSVLKNSKDYIEALKYARLIGDNLTATLDQEGIQIFPYSVFYVYYEQYLT
IWADFLKSINYSLTLVFVVTFVLTGLDLFASSVIIVTVTMIVIHMMGMMYLWNISLNAIS
MVNLILSVGIAVEFCGHLVHSYVRSSESSSLDRATDALGNMGSSILTGITITKFSGIVVL
AFSSSQIFQIFYFRMYLLMVLIGAFHGLIFLPVFLSFVGSIKYT
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggtgttctacctgctctgtctgctttgtttctcgttggccacaggctatact
gccgaaaagcgagaacctaaatgtcacttcttgcatgtttgcaaccatgatccgaaggac
cgtgaccaaaattgcgtggaggtgacgcctcctgagcgtttaaacctcactgatcctgaa
gctaatgcaaccaacacacaaatcagggagtattgtccctttttgtacgaaggaactgat
aagaaagtggatgataatccagcgctatgttgtgatttagatcaaatgaaactcacaata
aatgggttcgagaagtcagctcctttttccaggtgtcctacctgcatcaaaaatatccaa
aggtttttctgtctagtctcgtgttcgccatatcaatattacatgaccagttcgtataag
tctgaacgaaatgaatcaacaggtgttgaatatgtaacggaggtgcacttgttcagcaag
aatgaaacgctaactgaaatttacaattcttgcaaggacgtgtctttgccaagcacagga
gaacgtgtactacaaagtgcttgtggcaattatggcgcgatttggtgcactcccaaaagg
tggtttgaatttatgaacgatccagatcaaaacattttctctccttttaagattctctac
gaagacgacataaatggcacgagccctttgaattttgatgttccgtcatgccaggaagct
tatgaaaattcatccgcctgcagttgttcagactgtccggtcaactgtccattaattcca
tttgttagcatatctagcgatgaaactctcttctggaatataaataagtattctttctat
gtctctgtcgggctatttttgcttggatccgtgggattggtggttggattggtgctcagc
cgctttataacgtcgataacaccagatgtaccgcagagagccaaaggaaaatttgcgaaa
atacaagaaaatattcacaaatacctctacaaattcttcaaagcttggggatacttaata
gcaaaaagatggggaatcgttcttctaacaacctcagtgatagtcgcagcagcatcctca
ggaatctatcatctaaacgttaccacggaccccattgaattatgggcatcccctacaagt
cgaagcaggcaggagaaggaatttttcgatacaaatttttctcctttttacagaacaaat
caaatctttatcaaaacagtctcaatgagttcgttttatttcaactcaacctatggagga
aacatcatattggggccggcatttaatgacacattcctggaagaagtgttcaagttgcaa
cagaaaatagaagctattacggtgaaagtagatgggcgaactatcggtcttaaggacatt
tgctattcaccattgaggacccccttctatggtagtcggtcaattgatgagtgcactgtt
atatcgttgctgggactcttctctaataatttaaattctttcaaaagtgatattcaatcg
agcactgagaaaataatcggttgtttgcaagccccaacaggattaaattgcctcgctcct
tatgggggtccagtaatgcccggggtagccatgggtggaactacacaagacgaccactta
gatgcggttggtgtatcattaacattcattctcaacaacaataaaaataaaagcgaactc
gctggaacttttgcttgggagaaaaaatttattgagttcatgaaatcttgggatggttca
aaggacaaaccatcgttcatgaacgtggccttcagcgcggaaagatccatacaagacgag
atcgaaaggcagtctagctcagaaatgataactgtaataataagctacctggtaatgttt
agttatatagcgatctctttgggaaaaattacgaggttcaagggaattttgctggaaagc
aagttaatgcttggtacaggtggcatagttatcgtgttctcatcggtgactgcagcaatt
ggcttgtgctcttacatcggaattaccaccacaatgttaacacttgaagtaatccccttt
ctagtgctcgctgtaggggtagacaacattttcatcatggtacagacttatcaacggtca
cctggacgtcctggtcagtcagttgctgagtgcataggtgatatgctgggcaaagtcggt
cccagtatgctcttgactggcatttccgaaataatgtgctttgctattggttctttatcg
tcaatgccagcagttcagacctttgcagtatatgcaactatagcagtagcactggatttt
ttattgcaaattactgcgttcttggcacttttcgctctagatcaaatgcgatatagggcc
ttgcgtttggatgtgctattttgcatcaagctaaattacttcgaaaatagcgataaacct
tccattatccacaaattttggaagaaaaaattcactcccttaataatgaaatttccgata
agggtcatagtaatgatattgtttctaatatcaacatgtgcttgcatagcaattgcccca
tcaatagaattgggactggagcagcaactctcgatgccaaaggacagtcacgttctgaaa
tactttaaattcttgaacaatctactagggacaggccctccattatattgggttattact
ggcaatgtggatttctccaacaaaaccttgaaaaacaggttctgcagtggcgtaggatgt
aatgaagactctatagtaactcaactctatttggcttccaaaatggaaaatataacctac
atttcatcccaatcaaattcttggattgacgacttctacgattgggcagccgctgaaaaa
tgctgcaagttcttcaatagtaactcatcattttgccctcacacatacacgaccgatctt
tgtgagtcttgtgactatgccactctgtcacgtaaggatccgaaaatgaacgaggccact
tactacttgaattacttaccatattttctgatggataatccggatgcggtatgcgctaaa
gggggtcatgccgcttattaccaaggcatcgctttttccaacgataactcaggtaaaacc
agcgtggccacctcgagcatcatgtcctaccactcagtcctcaaaaactccaaggactat
attgaggctctaaaatatgctcgattaattggggacaatttgaccgccacattagaccag
gaaggcattcaaattttcccatatagtgtgttctacgtatattacgagcaatacctaacc
atctgggcagactttctaaagagtataaactactccctgacgctagtatttgtagtaact
tttgttcttactggtctggacctctttgcctcatctgtaattatagtcactgtgacgatg
attgtaattcacatgatgggcatgatgtatctctggaacatatccctaaacgcaatttct
atggtcaacctaatattgagtgtggggatcgcggtagaattttgcggccatttagttcac
tcttatgtacgttcttcggagtcctcctcactcgacagggccaccgatgcattgggaaac
atgggaagttccatattaactggtatcaccatcaccaagttttctgggatagtagttttg
gcattctcaagctcacagatattccagatattctacttccggatgtatttgctaatggtc
ctcattggggcctttcatggcctaatatttttgccggtgtttttaagctttgtgggaagc
attaaatacacttga
DBGET
integrated database retrieval system
