Euwallacea fornicatus (polyphagous shot-hole borer): 136342331
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Entry
136342331 CDS
T10685
Symbol
Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136342331 (Prp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efor03041
]
136342331 (Prp40)
Spliceosome [BR:
efor03041
]
Complex A
U1 snRNP components
U1 related factors
136342331 (Prp40)
Complex B
136342331 (Prp40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
136342331
NCBI-ProteinID:
XP_066144108
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All DBs
Position
12:complement(3865433..3872920)
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AA seq
757 aa
AA seq
DB search
MDPNVAPQSSFVAPPGIGTPPLMQQMPMPGMPGFPPIMPPAFSVPPPGFGAAMPSVTPVA
TSNTGSSTEWTEHKAPDGRIYYYNNLTKQSSWQKPDCLKTAGELLLSQCPWKEYTTDNGK
IYYHNVNTKESRWVIPPELDEIKRRVVEESKPKSGPVTPKEISSPLPASTPISGADSPNA
SNPASSPGSKSNALEAAMAATLAAISIPTPPSKPDDESNLTNHSDKKDCKTAVPELKVYT
DKKEAMEAFKELLKEKNVPSNASWEQCLKIIQNDPRYGSFKKLNEKKQVFNAYKTQKQKD
EKEEQRNKAKRSKEQLEEYLMHADKMTSTTKYYKCDELFGHLEVWQSVSDQDRRDIYDDV
VFALAKREKEDGKSMKKRNMKKLTEVLECMTKVNYDTTWTEAQVMLLENVAFKNDVNLLA
MDKEDALIVFEEHIRLLEKEYLEDKEREKRRQKRQYRKNRDQFLALLDHLHEEGKLTSMS
LWVELYPIISADIRFSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIKEILKEKEFEVK
VSTTFDQFATVICEDKRSATLDAGNVKLTYNSLLEKAEMREKERLKEESKRMKKLESAFK
SLLREMNIDFEKSWEEIKPKLENEDEFKAFDSDSERQRVYKDFQHEMEESCSHHHSRSRK
SKKNKKSKSKYRSTSSSDSDDKEKDKYRKSKHRSRSGSPDSESDEHGNNKKKKSKRKHRR
RSRSSSPSDRARSGEISESELEKQRALLLAKLKDESD
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaatgtagcacctcaaagcagctttgttgcacctcctggaataggaacccca
ccattgatgcagcagatgccaatgcctggaatgcctgggtttcctccaattatgcctcct
gcattcagtgtacccccaccaggttttggtgctgcaatgccttctgttacacctgttgcc
actagtaatacaggaagtagcactgaatggactgaacataaggcaccagatgggagaata
tattattacaataatttaactaaacaaagttcttggcaaaaacctgattgtttgaaaaca
gcaggcgagttgttgttgtcccaatgtccatggaaagaatatacaactgataatggtaaa
atctattaccacaatgttaatactaaagagtcaagatgggttattccccctgaactagac
gaaatcaaaagaagggttgtagaagaatccaaacctaaaagtggaccagttactccaaaa
gaaatttctagcccattacctgcatccacaccaatatctggtgccgattcaccaaacgct
tcgaatcctgcgtcgagtccaggatcaaagagtaatgcgttggaagctgccatggctgcc
actttggcagcaatttccataccaacacctccatctaaaccagatgacgaatcaaacctg
accaatcatagtgataaaaaggattgtaaaacggcagtacctgaactcaaggtgtatact
gacaagaaggaggcaatggaagctttcaaagaattgctaaaagaaaaaaatgttccttca
aatgcaagttgggaacaatgccttaaaatcatacagaatgatccaagatatggatctttt
aaaaagttaaatgaaaagaaacaagtttttaatgcttacaaaacccagaaacaaaaagat
gagaaagaagaacagcgcaataaagcgaaaaggtctaaggaacagcttgaggaatatttg
atgcatgctgataaaatgacttccaccaccaaatattacaaatgtgatgaattgtttgga
catttagaggtttggcaaagtgtttctgatcaagacagaagagatatttatgatgatgta
gtgtttgctctagcaaaaagggaaaaagaagatggaaaatctatgaaaaaacgaaatatg
aaaaaattaactgaggttttagaatgtatgactaaagtaaattatgacacaacttggaca
gaagcgcaagtaatgctgttagaaaatgttgcatttaaaaatgatgtaaacctgttggca
atggacaaggaagacgcacttattgtatttgaagaacatattagacttttggaaaaggaa
tacttagaggacaaggagagagaaaaacgtaggcaaaagagacaataccgcaagaacagg
gatcagtttttagcccttctagatcatcttcatgaagaaggaaaattgacgtctatgtca
ttgtgggttgaattatatccaattatttctgctgatatacgtttttccgctatgttaggt
caatccggttcaactccattggacttgtttaagttttacgttgaagacttgaaatcgcga
tttcacgatgagaagaagataatcaaggaaatcttaaaggaaaaagaatttgaagtgaaa
gtttcaactacatttgaccagttcgctactgttatatgcgaagataagcggagcgcaact
ttagatgctggaaatgtgaagttaacctacaattcgttgctagaaaaggcagaaatgcga
gaaaaagaaaggttgaaagaagaatcaaaaaggatgaagaaattggaatctgcatttaag
agtctattaagagagatgaacattgattttgagaagtcctgggaggaaattaaaccgaaa
ctcgagaacgaggacgaatttaaagcgtttgatagcgattctgaacgacagagggtttat
aaggattttcaacacgaaatggaagagtcttgttcccaccatcattcgcgctctaggaag
tcgaaaaagaataagaagagcaaaagcaagtatcgaagcactagttctagcgattcggac
gataaagaaaaggacaaatatcgaaaatcaaaacacaggtcacgaagtggcagtccagat
tctgagagcgatgaacacggaaataataagaaaaagaaatcgaaaaggaagcatagaagg
aggagccgatccagttctccgtcagatagagccaggagtggagagataagcgagagtgag
ctagaaaagcaacgggctttgcttttagctaaactaaaagatgagagtgactag
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