Euwallacea fornicatus (polyphagous shot-hole borer): 136342479
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Entry
136342479 CDS
T10685
Symbol
Vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
efor04131
]
136342479 (Vps50)
Membrane trafficking [BR:
efor04131
]
Protein recycling
Others
EARP complex
136342479 (Vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Sec8_N
Motif
Other DBs
NCBI-GeneID:
136342479
NCBI-ProteinID:
XP_066144425
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Position
12:complement(2877376..2885200)
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AA seq
951 aa
AA seq
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MDEFKQKLMGLLNKQPPKIPSMGFDDSNYHFPQMPTLSINSKTAQDSDRPADQDILESIE
AAYFSTSDDFDICRFELMKLPETLDCHQIQQDFKNLKQQHSVVSKKVLQMILEHQSACND
EFKNIQVILEHLTDTLNQCRESRRQLAVCGKQCSSSLGILANYRKRKLSQRLLSNLNMIK
NLHSFDKRCQQLLNDEDYVGTISELKKCQKTAIKYRHFSCVAALTYKLQETLENTDTKFD
RILAEMCYHFDSERYRKLQLAYDLLEKSQVAMIDNIHVHYITAIYNSSFNIVNSFVASTD
VLESGVNGGKNPYKTLCQSVPQDCFISCLVQLCKVLFKIVLSYHQLAIWYNNIEEGQDEG
DLDVELSMGKQKLEHNVVKIWDDVQRKVSSLLLNAHLAAYKFDQFVQVLRVVHRLIQVGE
EFCGSKSEDLQESIRKQSACYFKNYHAQRLEELKIFMENEMWEICPVKPAFSILQLQEFK
SVRSALKNYKNTPQMSPTTPVYSTNSTECSSCHSQDGSSVTGTYFVRYANHGTPFDGSLD
EAIVEEDILAIDNTKGSGYFSEDSEEDEEAEELKREFVDEERNPNKNNENKRRHQENCPI
LTNTTLSVLRQVGKYLQMSRLLKPISFQIISCMNQLFDYYLYSVHLFFASDLAVSGNNLY
TEELSMTLRKISDNMIFEPPIQETEYTMPEGYICKPSLSTMVELKSPEKLHGLAERVVAV
ESLIFLSKQYEFLQDYLEHLIPQTNRIMLQQFFSQNVVSAMHLRKPVYMSVVAQAFDLRQ
ILTSMSKINWEVKEVMSQHNSYIDLILREVQIFRLRLDEVAHKVPISTEVYKVLWESIAH
IVTHTLVQGFSDAKKCSNAGRALMQLDFTQFLMKFEKISSLKPVPHKEYVENYVKAFYLP
EIELEKWIKDHKEYSSKHLFGLVSCACQSNKKTRQRMLQIIEETEKGFFGR
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatttaaacaaaaattaatggggcttctaaacaagcagcctccaaaaatccct
tctatgggctttgatgattctaactatcattttcctcaaatgcccacattatcaatcaac
agcaaaactgcccaagatagtgatcgacctgcagatcaagatattctagagagcattgaa
gctgcctatttttccacaagtgatgactttgacatttgtagatttgaattaatgaaactt
ccagaaactttagactgtcatcagatccaacaggattttaagaatttaaagcagcaacat
tcagttgtgtctaaaaaagtgctacaaatgatcttagagcatcagagcgcatgcaatgat
gaatttaaaaacattcaagtaatattggaacatctaacagatactttaaatcaatgtaga
gaaagcagacggcaactagcagtatgtggcaagcagtgctcttctagtttaggtattctt
gcaaattacagaaaaagaaagttgtctcaaaggttgttgagtaacttaaacatgatcaaa
aatttgcatagctttgataaaagatgtcagcaactgttgaatgatgaagactatgtgggg
acaatatctgagctaaaaaagtgtcaaaagactgcaatcaaatatcggcactttagctgc
gttgcagctttaacttataagttgcaggaaaccttagaaaacactgatacaaaatttgat
agaattttagcagaaatgtgttaccactttgacagtgaaagatatagaaaacttcaattg
gcctatgatttgctggaaaaatcgcaagtggcaatgattgataatattcatgtgcactat
attacggctatatataattcttcttttaacattgttaattcatttgttgcttccacagat
gttctagaatctggggtaaatggcggaaaaaatccgtacaaaactttgtgtcagtcagtt
cctcaggattgcttcatttcatgtctagtccaattgtgtaaagtattattcaaaatagtt
cttagctaccatcagttagccatatggtataataatatagaagaagggcaagatgaggga
gatttggatgtagagttaagtatgggcaagcaaaaattggaacacaatgttgttaaaata
tgggacgatgtgcaaagaaaagtgtctagtttattactaaacgcccatttagcagcttat
aagtttgatcagtttgttcaagtactgagagtagttcatagattaattcaagtgggagaa
gagttttgcggcagcaaatctgaagatttacaagaatcaattagaaagcaaagtgcgtgc
tactttaaaaattatcacgctcaaagactggaagaattaaaaatatttatggaaaatgag
atgtgggagatttgccctgtgaagcccgcatttagtatactgcagttacaggaatttaaa
tctgtaagatcagctttaaaaaattacaaaaatactccacaaatgagtcctacaactcct
gtatattctactaactcaactgaatgctcgtcgtgccactctcaagacggcagtagcgta
acaggtacttattttgtaagatatgccaatcatgggactccattcgacggcagtttagat
gaggccattgtcgaagaagatattttagctattgataacactaaggggtctgggtatttt
tcggaggatagtgaggaagatgaggaagcagaagagctcaaaagagaatttgtggatgag
gaaagaaatcctaataaaaacaacgaaaacaagagacgacatcaagaaaattgtcctatt
ttaacaaacactactctttcagtgttgagacaagtgggtaaataccttcaaatgtctcgt
ctactgaaacccatttcctttcaaattattagctgcatgaatcaactctttgattactat
ttatacagtgtgcatttattttttgcttcagatttggctgtctcaggcaataatctttat
actgaagaattatcaatgaccctcagaaaaataagtgataatatgatatttgagccgccc
attcaagaaaccgaatataccatgcctgaaggctacatttgtaaaccttccctttcgact
atggtcgaattaaaaagccctgaaaaactgcatggtcttgcagaaagagttgtggcagta
gaaagcctaattttcctgtcaaagcagtacgagtttctacaagattacttggaacattta
ataccccaaacaaatagaatcatgttgcagcagtttttttcccaaaacgttgttagtgcc
atgcatctaagaaaacctgtctacatgtctgtagtggcacaggcatttgatctcaggcaa
attttaacgtccatgtccaaaatcaactgggaagttaaggaagtgatgtcccagcacaat
tcttatattgatttaattctgagggaagtacaaatatttagactaagactagacgaagtg
gctcataaagtacccatatcaactgaagtttataaggtgttgtgggaaagcatcgcacat
attgttactcatacgttggtgcaaggtttttctgatgccaaaaagtgttcgaacgccggg
agagcgttgatgcaattggattttactcaattcttaatgaagtttgagaaaatttcgtcg
ctaaaaccagtacctcataaagaatatgttgagaactacgtaaaggcgttttatctgcct
gaaatagaactagagaagtggatcaaagaccataaagaatattcatcaaaacatctcttt
ggcttggtgagctgtgcctgtcaaagtaacaaaaagactcgtcagcgaatgttgcaaatc
atagaagaaaccgaaaaggggttttttggtagataa
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