Euwallacea fornicatus (polyphagous shot-hole borer): 136342533
Help
Entry
136342533 CDS
T10685
Symbol
Cals
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
efor04515
]
136342533 (Cals)
Cell adhesion molecules [BR:
efor04515
]
Cadherins
Cadherin related
136342533 (Cals)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Glyco_hydro_16
Laminin_G_2
Cadherin_C_2
Toxin_R_bind_N
SMP_2
Motif
Other DBs
NCBI-GeneID:
136342533
NCBI-ProteinID:
XP_066144534
LinkDB
All DBs
Position
12:137777..197094
Genome browser
AA seq
942 aa
AA seq
DB search
MRKNVGVMSVVRVLCVLVFGYCVVSSQSQEFSIDDAPRLDISNLENGYHGIVKENETVVE
VTPPIRAVGVEVCRFRIVNKHHGEAPFEIELREDGHAELRARRSLNCEKRKNYKFDIAAV
GCNGKQSVSATVHITVSDVNEYAPTFTEPSYVRQVDEGRIYPEIVRVEATDRDCTPKFGD
VCKYEILTSDQPFVIDMDGVIRNTEPLDYERSHNHILSVIAYDCGMRQSFPALVTIKVNR
VCRLGWRGLPDRVDYAPMTGKQELFPSASLELCDVPCNVRELRARVDLATRHIGKGCDRD
TYSVQSQRKLCGASPSAIDLLPSPGAGAEWTKPLISDEGHESDQMFEFDGSSTAVSIPNS
VLDHNLPPTFTIATWMRHGEHNGQDKHTKEHILCSADDHNPPHHRTFEMNRHHYALFVRN
CRLILLLRRDFSEGDLNIFRPAEWRWKIPQVCDDQWHHYAINVRFPDVELYVDGQLFRTE
KKNPEVIDDWPLHPTKGINTTLTVGACWQGSDNKMKHHLKGYLAGLSVLVGENEKPEVLS
CLHQCKESLQVPSMELLQPGMELLTNSDLTEVTVEGDNRTNLEILVRKVGYANTREFPTP
GRRNLRLTTTVTCDNGKTVKVPDAQTYVMVLRPQTPSINLNGTGNMARKYEDFRMGVRVL
ADIHITGEQKLDKCQLTIYPNLNPDHENLGVPEEMLKHLGMAARVSKDGVTISGSDMVFN
YQQVLRQLVYTNRKPAYYLNRVFKLTCSELNGRFTSNEYVQTLTVIHPQPKESIVAHAKV
NKHNVEVRPASVISRDYAQSNRLNLMASGGSHAVTIIVVVCVGFLLFMIVLGIVRIRAAH
QKASSEEAQDGEMTWDDSALTITVNPMENAERKLERTGVSGEYSESEQSDSESSSDEDGP
GDGPCRIRADSSDEEEDDIPASTRRKRDYQNVSQLEWDNSTM
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaaaacgttggagtcatgtctgtggtgcgggtgctgtgcgtcttagtgtttgga
tactgtgtggtctccagccagagccaagaattcagcatagacgatgcccctcgtctggat
atctcgaatctggaaaatggctaccatggtatcgtgaaggagaatgaaactgtcgtagag
gtcactcctccgatcagggctgtgggggtcgaggtgtgtcggttccggatcgtgaataaa
catcacggtgaggctccttttgagatcgaacttcgggaggatggacacgccgaattgaga
gcgaggaggagcctcaattgcgagaaaagaaagaattataagtttgatattgcggcagta
gggtgcaacggaaaacaaagtgtcagtgcgactgttcacatcacagtgtctgacgtcaac
gaatatgcacccaccttcaccgaacccagctacgtcagacaggtcgacgaaggacgaatt
taccctgaaattgtgcgagtggaagctactgacagggattgtactcctaaatttggtgat
gtatgcaaatacgaaattttaaccagtgatcagcccttcgttattgacatggatggagtt
ataaggaataccgaacccttggactatgaacgatcccacaaccacattttaagcgtaatc
gcctatgattgcggaatgcgccagtcgttccctgctctggtgacgataaaagtgaacagg
gtgtgtaggttgggctggagagggctgcctgatagggtggactacgctccaatgactgga
aaacaggaattgttccccagtgctagtttggaattgtgcgatgttccttgtaatgttagg
gagttgagggccagggtcgacttagcaacaaggcacattggcaaaggttgcgatagagac
acatattctgtgcaatctcagcgtaaactttgcggagcttctccttcagcgattgacctc
ttgccatcacccggagccggagctgaatggaccaaaccgctgatttccgatgaggggcac
gaatcggaccagatgttcgagttcgatggcagcagcacagcggtttcaattcccaattcc
gtgttggaccataatttacctccaactttcactattgccacctggatgagacatggagaa
cacaatgggcaggataaacacactaaggagcatattctttgttctgccgatgatcacaat
ccgccacaccatcgaacctttgaaatgaacagacatcattacgctcttttcgtgagaaat
tgtcgtctgattttgctgctgagacgcgacttctcggaaggggacttaaacattttcagg
cctgcagaatggagatggaaaatccctcaggtctgcgatgatcagtggcatcactacgcc
atcaacgtccgcttccccgacgtcgaactctacgtggacggacaactcttcagaaccgaa
aagaagaaccctgaagtgatagacgattggcctttgcacccaactaaaggcatcaacacc
actctaaccgtcggggcctgctggcagggctccgataacaagatgaagcaccacttgaag
ggatacttagcaggattgagcgtcctcgtgggtgaaaatgagaaaccggaagtgcttagc
tgcctccatcagtgcaaagagagcttacaggtcccaagtatggagttattacagcccgga
atggagcttctgactaactccgatttaacggaagttactgttgaaggagataatcgtacc
aatttagagattttggttcgtaaggtcggctacgccaacactagagaatttccgactcct
ggaaggagaaacttgagactcactactacggttacttgtgataacggaaaaactgttaag
gtaccagacgcacaaacttacgtaatggtcctgcgtcctcaaacccccagcataaatctt
aatggtaccggaaacatggctagaaaatacgaagattttcgcatgggagttcgtgttttg
gccgatattcatattacaggagaacaaaaactggacaaatgccaactgaccatctaccca
aatttaaatcctgaccacgaaaacttgggggtacccgaagagatgttgaagcacctcgga
atggccgctcgcgtatccaaagatggagtcaccatcagcgggtccgatatggtcttcaac
taccaacaagtattgaggcagctggtctacaccaacagaaaaccggcctattacttgaac
agggtattcaaattgacttgttcagaattaaatgggaggttcacaagcaatgaatatgta
cagacgcttacagtcatccatcctcaacccaaagaatcgatcgtggctcacgctaaagtg
aacaaacataacgtggaagtgagacctgcttctgtgatctcacgcgattatgcccaaagc
aatcgtctgaatttgatggcgagtggaggttctcatgccgtgaccattattgtggtggta
tgcgttgggttcttattgttcatgatcgtcttagggattgtcagaattagagctgcccat
cagaaggcatccagcgaagaagctcaagatggagagatgacttgggatgactccgctttg
actattacagtgaatccaatggagaatgctgagcgtaaattggaacgcaccggcgtatca
ggagagtactcggagtccgagcaatccgattccgagtcctcatccgatgaggatggacca
ggagatggaccttgccgcatccgagctgattcttcagatgaggaggaggacgacattcca
gcttcaactagacgcaagcgagactaccaaaacgtgtcgcaactggaatgggacaacagc
acaatgtaa
DBGET
integrated database retrieval system
