Euwallacea fornicatus (polyphagous shot-hole borer): 136342739
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Entry
136342739 CDS
T10685
Symbol
RpA-70
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03030
DNA replication
efor03420
Nucleotide excision repair
efor03430
Mismatch repair
efor03440
Homologous recombination
efor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136342739 (RpA-70)
03420 Nucleotide excision repair
136342739 (RpA-70)
03430 Mismatch repair
136342739 (RpA-70)
03440 Homologous recombination
136342739 (RpA-70)
03460 Fanconi anemia pathway
136342739 (RpA-70)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efor03000
]
136342739 (RpA-70)
03032 DNA replication proteins [BR:
efor03032
]
136342739 (RpA-70)
03400 DNA repair and recombination proteins [BR:
efor03400
]
136342739 (RpA-70)
Transcription factors [BR:
efor03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136342739 (RpA-70)
DNA replication proteins [BR:
efor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136342739 (RpA-70)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136342739 (RpA-70)
MMR (mismatch excision repair)
136342739 (RpA-70)
DSBR (double strand breaks repair)
HR (homologous recombination)
136342739 (RpA-70)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
BRC-2_C
C1_2
Zn_ribbon_TiaS
Motif
Other DBs
NCBI-GeneID:
136342739
NCBI-ProteinID:
XP_066144940
LinkDB
All DBs
Position
12:complement(4601391..4605831)
Genome browser
AA seq
626 aa
AA seq
DB search
MAAIPLTDGALLDIMQEKDCADVQPIIQVLSIKKMNTGSGHPDKDRYRLNVSDGTTSLSY
AMMTGPVFFKAGEKGIPKYTIIKLIRYITSVVNNTGGVNSRVLLIMDMKVMQDGDEVGIK
IGDPVPYSENQIASKSHVVQKPSASSSSNSSSTSNNQDAERPAKVPRLMPSASIASNSNG
NGTTNNTGHLVTHITHPIASLSPYHNKWVVKAKVINKSDIKKWENARGTGQLFNVEFADE
SGDIRCTAFRDQVDKFYNLLEVDKVYYISKCQVKPANKQFNPSKNHYEMAMTADTIIQEC
TDDKMSNLETKYEFVPIVKIGELETGKLVDVLGIVSSVGELVEFSAKSTGRVLKKKDIQL
LDESTSTINLTLWGSQAENFVATDHPVIALKGAKINEFGGGKSLSTGLGTIMKINPDLKE
CFALKGWYEREGMNVTASDLSARNNTGSFNVPWMTFREVQDQQFGTIDPAKGDYYKVKAT
VLLIRAEKSIYKACVGCNKKVIDNGDNTYRCEKCKTSDTNFKYRLLCGMNLGDWTGNQWV
SMFSDEAEKVLGMTAQEAGELFETESLHYEEMIQKCHFKELIFTCRVKMEQYNDEARLKT
VAVRVEPINYSDYMSHLVADIKKYVL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctgctatacctctcactgatggtgccctcctggacataatgcaagaaaaggattgt
gcagatgtgcagcccataattcaagtcttgagcattaaaaaaatgaatacaggctcaggg
cacccagataaggataggtatcggttaaatgtgtctgatgggacaacttcattgtcttat
gccatgatgactggtcctgtattcttcaaggctggtgaaaaaggaattcccaagtatact
attatcaaacttattcgatatattaccagcgttgtaaataatactgggggagtaaatagt
cgtgttctacttattatggatatgaaggtcatgcaggatggtgatgaagttgggattaaa
attggggatcctgttccctattcagagaatcaaattgcctcgaagtcacatgtagttcag
aagccatcagcttcttctagtagtaactctagtagtacctctaataatcaagatgcggaa
cgcccggcaaaggttcccaggttaatgccatctgcaagtattgcaagcaatagtaatggt
aatggcacaactaataatactggacaccttgtcacccatattacacatcctattgcaagt
ttgagtccttatcataacaagtgggttgttaaggcaaaagtgatcaacaagagtgacata
aaaaagtgggagaatgctagaggcactggtcaacttttcaatgtagaatttgctgatgaa
agtggggacattagatgcacagctttccgagaccaagtagacaaattctacaatttgctt
gaggttgataaagtatattacatctcaaaatgccaagtgaaacctgcaaacaagcaattt
aacccgtcgaaaaatcattatgaaatggccatgaccgctgacaccattattcaagagtgt
actgatgacaaaatgtcaaatttggagaccaaatatgaatttgttccaattgtgaagatt
ggggagttagaaaccggcaaactagtggatgttctgggaatcgtatcttcagtcggcgaa
cttgtcgaattcagtgctaagtcgaccggtcgcgtactaaagaaaaaagatattcaacta
ttggacgaatctacttccactatcaacttaactctttggggcagtcaagccgaaaacttt
gtggcaactgaccacccagtgatagctctaaaaggggctaaaatcaatgaatttggaggt
ggaaaaagtttgagtactggtctggggactataatgaaaattaatccggacctgaaggag
tgttttgctcttaagggttggtacgaacgagaaggaatgaatgttacagccagtgatctt
agtgcacgaaacaataccggtagttttaatgttccttggatgactttcagggaggtacag
gatcaacagtttggtacgattgacccagccaaaggggattattacaaagtaaaggcaaca
gtgttgctaattcgagcggaaaagtctatctataaggcctgtgtcgggtgcaacaagaaa
gtcattgacaatggggataacacatatcgatgtgaaaaatgcaagacaagcgataccaat
ttcaagtacagactgctgtgcggaatgaatttaggggattggaccggtaaccagtgggtg
agcatgttcagcgatgaggctgaaaaggtgctcggtatgactgcgcaagaagctggtgaa
ctttttgagaccgagtccttgcattacgaagagatgattcagaaatgccatttcaaagaa
ttaatattcacttgcagagttaaaatggaacaatataatgatgaagcacgcttgaaaacc
gttgcagtgagagtcgagcctataaattactctgactacatgtctcatttggttgctgat
atcaagaagtatgttttgtaa
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integrated database retrieval system
