Euwallacea fornicatus (polyphagous shot-hole borer): 136343095
Help
Entry
136343095 CDS
T10685
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03022
Basal transcription factors
efor03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
136343095 (Ssl1)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
136343095 (Ssl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136343095
NCBI-ProteinID:
XP_066145601
LinkDB
All DBs
Position
13:4758686..4760506
Genome browser
AA seq
396 aa
AA seq
DB search
MNDEDPREYRWETGYEKTWEAIKEDDEGFLEASVADIILRAKRRRQTQKQGNTKLGMMRH
LYLILDCSESMSSQDLKPTRMICTLKILEGFIEEFFDQNPISQMGIILLQNKRADKVCDL
GGNFRKHIKHLKTLMKTNLVGEPSLQNGLEQALSSLKLLPSHASREVLIIMGSLTTCDPT
DISSTIEKLKQEGIRCSIIGLAAEVHVCRTLASETKGTYNVILDDSHLKDLLYQQVEPSP
AAAALESSLIKMGFPHQMNTEGTDEPLTMCMCHIDSVDEGSKLTAGGYYCPQCLSKYCEL
PVECRACGLTLVSAPHLARSYHHLFPASNYREVPFTNQASICYACQKLFGDEDKLIYQCP
TCKRMFCIDCDMFIHDTLHTCPGCATNLATFQLTHN
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgaggatcctcgggaatatcgttgggaaacgggctatgaaaagacttgggaa
gcaataaaagaggatgatgaggggttcctggaagcttcagtggccgacatcattttacga
gcgaaaagacgcagacaaactcagaaacaggggaacactaaattaggaatgatgagacat
ctttatcttattttagattgctctgagtccatgtcaagtcaagatttgaaacccactaga
atgatatgcactttgaaaattctagaaggttttattgaggaattttttgatcaaaaccca
attagccagatgggaataattctcttacaaaataaaagagcagataaggtgtgtgatttg
gggggaaatttccgtaaacatatcaaacacctcaaaactttaatgaaaacaaacttggta
ggagaaccttctctccagaatggcctagaacaagcactatcttctctaaaactattacct
tcacatgctagtagagaagttttaattataatgggaagtttaaccacttgtgatcctaca
gatatttctagcactattgagaaattgaagcaagaaggcatacggtgttcaataataggg
ttggctgctgaagtgcatgtttgtcgaactttggctagtgaaaccaaaggcacatacaat
gtaattttggatgacagccatttgaaagatttattgtatcaacaagtagaaccttctcct
gcagctgctgcccttgaatctagtttaattaaaatgggttttccacatcagatgaatact
gagggcactgatgaacctttgacaatgtgcatgtgtcatattgatagtgttgatgaaggg
agcaaattaactgccggaggctattactgcccccaatgtttgagtaaatattgtgagctt
ccagttgagtgtagagcatgtgggttaaccttagtgtctgctcctcatttagccagatca
tatcatcatctatttcctgcctcaaattatagagaagtaccatttaccaatcaagcatca
atatgttatgcctgccaaaaactatttggcgatgaagacaaattgatttatcaatgccca
acctgcaaaagaatgttttgcatagattgtgatatgtttattcatgatacattgcatact
tgtccgggctgtgccacaaatttggcgacatttcaattaactcataattaa
DBGET
integrated database retrieval system
