Euwallacea fornicatus (polyphagous shot-hole borer): 136343458
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Entry
136343458 CDS
T10685
Symbol
Sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136343458 (Sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efor03041
]
136343458 (Sf3b1)
03036 Chromosome and associated proteins [BR:
efor03036
]
136343458 (Sf3b1)
Spliceosome [BR:
efor03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
136343458 (Sf3b1)
Complex B
136343458 (Sf3b1)
Complex C
U2 SnRNP specific factors
136343458 (Sf3b1)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
136343458 (Sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
HEAT_2
Htt_N-HEAT_1
XMAP215_CLASP_TOG
UME
Motif
Other DBs
NCBI-GeneID:
136343458
NCBI-ProteinID:
XP_066146291
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All DBs
Position
1:3645492..3653033
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AA seq
1319 aa
AA seq
DB search
MEVPRTHEDIEAQIRDLQSKKKELPVEETDKGVSLGESGYFDSEIYDGKDKKYEGYVTSI
AANDEVDDDEEDVGYSQKRTGLGAPVALLNDVAQSEKDYDPFADRRRLTIADREDEYRQK
RRIMIISPERVDPFADGGKTPDINARGYTQIMKETLLKGEENEVRRKIVEKAKEGSLKTQ
NGDAKVAPKKRGRWDQTVEESFVPAKKKTLSVSTPSTAATPVWEGDKTPADIRWDETPGH
KGSETPGATPGQSTRIWDATPGAATPGRETPGHDKASARRNRWDETPKTERETPGHSSGW
AETPRTDRTGADLIQETPTPGASKRRSRWDETPSAATPSNATMTPGAMTPQTPHGTPGHA
TPMLTPGGSTPVGVKAMAMGTPTPGHLASMTPEQLQAFRWEREIDERNRPYSDEELDAMF
PPGYKVLPPPAGYIPIRTPARKLTATPTPLVGNTPVGFFIQAEDKTAKYMDNQPKGQNLP
FMKPEDAQYFDKLLVDVDEEALSPDEQKERKIMKLLLKIKNGTPPMRKAALRQITDKARE
FGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDE
DYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLL
PFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTIT
ALGIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYY
TREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKEEILPQFFKHFWNHRMAL
DRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDENEAYRKMVMESIEKIMGNLGAADID
SRLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSA
KVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIG
MTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLEL
LKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSP
FTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVAPLLEDALMDRDLVHR
QTACAAIKHMALGVYGFGCEDALVHLLNYVWPNIFETSPHLVQAFMDAIEGMRVALGPIK
ILQYTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIANDPKNQYLRYELDYNL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggaggttccgcgtacacatgaggatatcgaggctcagattcgagatttgcagagcaaa
aagaaggaattacctgttgaggaaactgacaaaggagttagtttaggagagagtggctat
tttgatagtgaaatttatgatggcaaagataaaaagtatgaggggtatgtaacctccatt
gctgctaatgatgaagttgatgatgatgaggaggacgtgggctattctcagaaaagaacc
gggctaggagctcctgtggctttgctaaatgatgttgctcagagtgaaaaggattatgat
ccatttgccgatcgtcgcaggctgactattgcagacagggaagatgagtacagacagaaa
aggcggattatgattatttcacctgaaagggttgatccttttgctgatggtggcaagacg
ccggatatcaatgctagagggtacactcagattatgaaagaaacccttttgaagggcgaa
gaaaacgaggtacgtcgaaaaatagtagaaaaagctaaagaaggaagtttgaaaacgcaa
aacggtgacgccaaagttgcacctaaaaaacgaggccgttgggatcaaactgtcgaagaa
tcatttgttccagccaagaagaaaactttgtcagtttcaactccgagtacggcggccact
cctgtttgggagggagataaaacaccagccgatattcgttgggacgaaactcccggccat
aaaggaagtgagacacctggggcgactcccggacaatccactcgtatatgggatgctact
cctggagctgccacacctggccgcgagaccccgggccacgacaaagcctctgctcggaga
aatcgttgggacgaaacacccaaaaccgaaagagaaactccgggacattccagcggatgg
gccgagacgccaagaactgacagaaccggagcagatctgattcaggaaactccaactcct
ggagcatcaaaacgtcgatctcggtgggatgaaacaccgtccgctgctactccgtcaaat
gccacaatgactcctggagcaatgactccgcaaactcctcacggaactcctggacatgcc
acccccatgttgactcctggtggatccacccctgttggggtaaaagcaatggcgatgggg
acgccaactcccggacacttagcatcaatgacgcctgagcagttacaggcgtttagatgg
gaacgtgaaatagacgaaagaaaccggccatattctgacgaggaattagacgccatgttc
cctccgggttacaaggtgttgccacctcccgcgggttatattcccatacgaacaccagcg
agaaagctcacggccactcctaccccgttagtaggaaatacacccgtaggattttttatt
caagccgaagataagactgcgaaatatatggacaaccagcctaaaggccagaacttaccc
ttcatgaaaccagaagacgcgcagtatttcgataaactgctggtcgacgtggacgaagaa
gcattgagccctgatgagcagaaagaacgcaaaatcatgaaactattattaaaaatcaag
aacggcactccaccgatgagaaaagcggctctaagacaaataacggataaagccagagaa
tttggtgccggccccttgttcaaccaaattttacccctcttaatgagtcctaccctcgaa
gatcaggagcggcatttgctggtcaaagtcattgacaggattctgtacaagttggacgat
ttggttagaccttatgtacacaaaattttagtggttatcgaaccattattgatcgatgaa
gattactatgcccgtgtcgaagggcgagagatcatttccaatcttgccaaggccgcaggc
ttggccactatgatctccactatgaggcctgatattgacaacatcgatgagtatgtgaga
aacacgacggctagggcgtttgctgtagttgcttctgctttgggaattccttccctgctg
ccattcttgaaagctgtttgccgttccaagaaatcctggcaggctcgtcacacgggtatt
aaaatcgtccaacaaattgctattctgatgggctgtgccatcctaccccatttgaaatcg
ctcgtcgaaattattgaacacggtttagtggacgagcaacaaaaagtgcgtaccatcaca
gctttgggtatagcagccttggccgaagctgcaactccttatggaattgagagtttcgat
tctgtattaaaaccattgtggaaaggtattagaactcacagaggtaaagggttagccgcg
tttctaaaagccatcggttacttgattcctctcatggacgccgaatatgcgaattactat
accagagaagtgatgttgattctgatcagagagtttcagtctccagacgaagaaatgaag
aagattgtgttgaaagtagtcaagcagtgttgcgccactgacggtgtggagccccaatat
attaaagaagagatattaccgcagttttttaagcacttctggaatcatcgaatggctttg
gatagaagaaattataggcaattggttgacactacggttgaaattgctaataaagtgggt
gcatctgaaataattaatagaatagtggatgatctcaaggatgagaatgaagcctacaga
aaaatggtcatggagagtattgaaaagataatgggcaacttgggagctgcagatatagat
tcccggttggaagagcaacttatcgatggtatattatatgcgttccaagaacaaaccact
gaagatgtcgtaatgcttaacggcttcggcacgatagtaaaccaattaggcaagcgtgtg
aaaccatatttgcctcagatttgtggcacaatactttggcgattgaataataaatctgcc
aaagttcgacagcaagctgcagatttaatttccaggattgcggtggtaatgaagacttgt
caagaagagaaactgatgggtcacttgggggttgtattgtatgagtatttgggcgaagaa
tatcctgaagtgttagggtcgattctcggggctttgaaagctatagtaaatgttattggt
atgactaaaatgactccgcccatcaaagatttgttgcctcgcctaacgccaatcctgaaa
aatcgtcacgaaaaagtccaggaaaattgcatcgacttagtaggtcgtatagctgacagg
gggcccgaatacgtctcagccagagaatggatgcgaatctgtttcgaactcctggagctc
ctaaaagcgcacaaaaaagcaattcgcagagctacagtaaatactttcggatacattgcc
aaagctatcggtccccacgacgttttggcaactttactcaataatttgaaagtacaggaa
cgtcaaaacagagtgtgcactactgtggctatcgccatagtggcagaaacttgctcccct
ttcaccgttttaccagctttgatgaacgagtaccgagtccccgaattaaacgtgcagaat
ggggtgttgaagtcgctttcgtttttgtttgaatatattggagaaatgggtaaagactac
atatacgcagttgcacctctcctagaagacgccctaatggaccgtgacctagtacacaga
caaaccgcgtgtgcggcaataaaacacatggctttaggcgtatacggttttggatgcgag
gatgctttggttcatcttttgaattatgtgtggccgaatatattcgagacctctcctcac
ctagtacaagcatttatggacgctattgaggggatgagagtggctctggggcctattaag
atattgcaatatacattacaaggattgttccacccggcaagaaaagtcagagatgtctac
tggaagatttataactcgttatacattggtggacaagatgctttagtggctggctatccc
aggatagcaaacgatccaaagaatcaatatttgcgatacgagttagattataatttgtaa
DBGET
integrated database retrieval system
