Euwallacea fornicatus (polyphagous shot-hole borer): 136343552
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Entry
136343552 CDS
T10685
Name
(RefSeq) nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03008
Ribosome biogenesis in eukaryotes
efor03013
Nucleocytoplasmic transport
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136343552
03015 mRNA surveillance pathway
136343552
03008 Ribosome biogenesis in eukaryotes
136343552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136343552
03009 Ribosome biogenesis [BR:
efor03009
]
136343552
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136343552
mRNA cycle factors
Stress granule specific factors
136343552
Ribosome biogenesis [BR:
efor03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
136343552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
UBA_4
UBA_8
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
136343552
NCBI-ProteinID:
XP_066146431
LinkDB
All DBs
Position
15:2560105..2562528
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AA seq
541 aa
AA seq
DB search
MSVQNAMTIQASPDSVLINETNLPSGIVFKHKNLLRNVKCWHKFIINNTEGLTRNEVLKC
ILDHVHPLDLIPVFFATDSTNAAAYFLARNCEAAVEKLCRDNLVVDHPYNKKSATRNFKP
FKLSIILSFANTNDIKIDVQKNVSSVLAKRYDVGNKLLNLDRFHEDPDLVEFCPLSQPKI
MYFVLHIAKGFVIHELILSNNGIKILAPLDVLANAKITRLDLSNNELNSLNELNSLKFLN
MSDLKLTGNILCDCEENEYISRIKTIFPSVEILDGIPISLDRIPTTKKYSFSDYEGTDLV
NQFLEYFFTAYDCDRRMLAGLYHRNAMFSTTCVYLAGQMSSNTANLRQYSNISRNLKKSA
DLSKTSQFLFLGRESILNAFNTKLALTEHDPFSFSADLMYKTDTCAVIVVTGVFHEKPTS
LLDKERFLGFTRSFALEISDKNCLIINDQLHVYNGLSFQERNSFHDSPASNQFVHREIIP
KPLTKSDFDHLTATFGQLTNLKEDWSRKCLKECNYDLKRALEMFVDLYKADRIPHNAFLT
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttcaaaatgccatgaccattcaggctagtccagattccgtactcataaatgaa
acaaatcttccatcaggaattgtgtttaaacataaaaacctcttgaggaacgtgaaatgt
tggcacaaatttattatcaacaacactgaaggattaaccagaaatgaagttctcaaatgc
atattagaccatgttcatcccttagacttaatacctgttttttttgctacggattcaaca
aatgcagctgcctactttctagccaggaactgtgaggctgcagtagagaaattgtgcaga
gataatttagtagttgaccatccttataataagaaatcagctaccaggaatttcaaacct
ttcaaattgtctataattttgagctttgctaacactaatgacattaaaatcgatgttcaa
aagaatgtgtccagcgtcttagcaaagcgatatgatgtgggcaataaattattgaattta
gatagattccatgaagatcctgatttagtggaattctgcccgctttcgcagccaaaaatt
atgtactttgtgcttcacattgcaaaaggctttgtaatacatgagcttatactttcgaat
aatggtataaagattttggctcctcttgacgtacttgctaatgccaagataacacgcttg
gacctgagcaataatgagctcaactctctgaatgaattgaactcccttaaattccttaat
atgtctgatttgaaattaactgggaacattctgtgtgactgtgaagaaaatgagtatatt
tcaagaattaaaactatctttccctcagttgaaattttggacggaattcccataagtttg
gacagaattcccaccaccaaaaagtactcattttcagactatgaggggacagacctagta
aatcagtttttggaatatttcttcacagcttatgattgtgacagaagaatgctggcaggg
ctgtatcatagaaatgcaatgttttctaccacctgtgtttacttagctgggcaaatgtct
tctaatactgccaatttgcgacagtacagcaacatttcaagaaatttgaagaaatctgca
gatttgtcaaaaacttcacagtttttatttttgggaagagagagtattttaaacgcattc
aatactaaattggcgttaaccgaacatgatccgttctcgttcagtgcggatctcatgtat
aaaactgatacttgcgcagtaattgtagtaactggagtcttccatgagaaacctacatct
ttattagacaaagaaaggtttctagggtttacccgatccttcgccctggagatatctgac
aaaaattgcttaataatcaatgaccagcttcacgtatacaacggtctatccttccaagaa
agaaattctttccatgattctccagcttctaatcaatttgttcacagggaaattattcca
aagcctttaacaaagtcggattttgaccatttgactgccacctttgggcaactcacaaac
cttaaagaagattggtcaagaaagtgtctgaaagagtgtaattacgatctaaagagggca
ctggaaatgtttgtggacttatacaaagcagatcgtattccgcataatgcatttctaact
tattag
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