Euwallacea fornicatus (polyphagous shot-hole borer): 136343724
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Entry
136343724 CDS
T10685
Symbol
me31B
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136343724 (me31B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136343724 (me31B)
03036 Chromosome and associated proteins [BR:
efor03036
]
136343724 (me31B)
Enzymes [BR:
efor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136343724 (me31B)
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136343724 (me31B)
mRNA degradation factors
5'-3' decay
Decapping complex
136343724 (me31B)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Gene silencing
piRNA pathway
136343724 (me31B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
136343724
NCBI-ProteinID:
XP_066146724
LinkDB
All DBs
Position
15:complement(2571627..2578551)
Genome browser
AA seq
446 aa
AA seq
DB search
MITDRISLNHLTMNSKLDVDPKNQDNKVDTNLDDLGWKSKLKIPPKDGRIQTSDVTDTRG
NEFEEYCLKRELLMGIFEKGWEKPSPIQEAAIPIALSGKDILARAKNGTGKTGAYSIPVL
EQIDPLNDYIQALIIVPTRELALQTSQICIELAKHLQLRIMVTTGGTNLRDDIMRIYQKV
QVIIATPGRILDLMEKGVAQMDHCRILVLDEADKLLSQDFKGMLDTVIRNLPSKRQILLF
SATFPLTVEQFMRKHLKEPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ
SIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRSGLCRNLVCSDLFTR
GIDVQAVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFSLHRIEQELGTE
IKPIPKVIDPKLYVAKPGEELEESDK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgataacggacagaatttcactgaaccatctgacaatgaacagtaaattagatgttgac
cctaaaaaccaagacaacaaagtcgacacaaatttagatgacctagggtggaaatccaaa
ctaaaaatccctccaaaggatggcaggatacagaccagtgatgtgactgacactagaggc
aacgagttcgaagaatattgcttaaaaagagaattattgatgggtatttttgagaaaggg
tgggaaaagccgtccccgattcaagaagcggccatcccaattgcgctgtcaggaaaggat
atccttgccagggcgaaaaatggaacaggtaaaactggtgcctactcaataccagtactg
gagcaaatcgatccattaaacgactatatacaggctttgataatcgtccctacaagagag
ctcgcgcttcagacgtcacaaatctgcatcgaacttgccaagcacttacagctccgcatt
atggtcacgacgggcggtactaacctgcgagacgacatcatgaggatttatcagaaagta
caagtaatcatagcgacccccggccgtattttggatctcatggaaaaaggagtggcacaa
atggaccactgcagaatcttagtattagacgaagccgacaagcttctttcacaagacttt
aagggtatgctagatactgtgatcagaaacttgccttcaaaaaggcaaatcctcctcttt
tccgccacgtttcccctcacggtggagcaattcatgaggaagcacctgaaggaaccctac
gaaatcaatctgatggaggagctgacattaaagggggtcacgcagtactacgcgtttgta
caagaacgtcagaaagtccattgtttgaatactctcttttctaagttacaaatcaaccaa
agtattattttctgcaactcaacgcaaagggtcgaacttttggccaaaaaaattacggag
ttgggttattgctgttattacatacacgcaaagatggcacaggctcatcgaaacagagtg
ttccacgactttagatcgggactgtgccgaaatctagtctgttcggatctgttcaccaga
ggtattgacgttcaagccgtaaacgtcgtcatcaactttgatttcccaaagatggccgaa
acctacttgcatcgcattggccggtcgggacgtttcggacatttgggtatcgccatcaac
ttaatcacgtacgatgatagattttcgttgcatcgcatcgaacaagaacttggaaccgaa
atcaagccaattccgaaggtgattgatccgaagttgtacgtggccaaacccggtgaagag
ctcgaggagagcgacaagtaa
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