Euwallacea fornicatus (polyphagous shot-hole borer): 136343821
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Entry
136343821 CDS
T10685
Symbol
spel1
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
136343821 (spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
efor03400
]
136343821 (spel1)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
136343821 (spel1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
136343821
NCBI-ProteinID:
XP_066146895
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Position
15:complement(1117431..1120608)
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AA seq
915 aa
AA seq
DB search
MAAEPLSISNLDLAQQQFIKFFQSLPEKSASTVRLFNRTDYYTAHGSDAQLAADFTSKII
KNMGEHSKLSYVCLSRHEMETFVRELLLVRQYRVEVYVKVAGKSNEWQLEYKGSPGNLTQ
FEHVLFENATIDSSNCVMAVKFGKERTLAVSNVNTTDLIFEVSEFVDNEHLTEFEALLAQ
ISPRECIIPNGNSSELINLKNILERNGILVAQVKKSDFSSDDIIQDLNRLLFFQVRQPRN
SERIPETNLNEAMSCLRAVISFLNLTGSETNFNQYRLKTVDAHRHVRIDNAALYALNILP
KPTFNSEGAPVFTASGKAYSLIGILNHCATPQGKRLLEQWIKQPLKDVNIIKERLDIVEC
LVHNLELQSAISKEALKRIPDLMLLSKKLSGEKAKLQDCYRLYQAINYLPSLVGMLSKIN
NKSVKDVIVSPLGELLADMAKFQTMIETLLDLNLVDRGEYLIKSNVSPELNELHKRKESI
EEKMQNLLHKAAKDLSLEEGKTIKLEFTSQHGYFFRITKKEEHALRHAKSYKIIDAVAGG
VRFRNENLNLLNEKYSSINESFEALQKEMVDEMLTVAAGYADTVRSINMVLATLDVLTSF
AIASVSAKIPYIRPILKTDGERVLKLEKVRHPCLEHQLPQDFIPNDVNFNQKDKTFYIIT
GPNMCGKSTYIRSIGVCVLMAHIGCFVPCENAEMSLVDGILARVGADDCQLKGLSTFMLE
MIETSTILKTATENSLVIIDELGRGTSTYDGCGIAWAIAEHLATDVKSFSLFATHFHKIT
KLVDSSPSVGNLHVSAMCSNDSIMPLYKVKPGECDKSYGIHCAKIAEFPIEVLDWASDNL
KELEHQEGMKFMEELEAEEKKAIIEKGDEHVRMALRTLKEIFEGQEANALEHSLSRIRSE
MRSQDNLFVKGMLSK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagcccctttcaatctcaaacttggaccttgcccaacaacaattcatcaaa
ttcttccagagtttgcctgaaaagagcgcctcaactgtccgcctattcaaccgcactgat
tactacactgcccatggatctgatgctcagctagcagcagattttacctcaaaaattatt
aaaaatatgggggagcattctaagctaagttacgtttgcttgagtagacatgaaatggaa
acttttgttcgtgagttgctgttggtacgccagtaccgagtagaggtctatgtgaaagtc
gcagggaagagtaatgaatggcaattggagtataaaggatctccggggaatctcactcag
tttgagcatgtgctttttgaaaatgccacaattgactcttcaaattgtgttatggctgta
aagtttggcaaagaaagaacgttggctgtgagtaatgttaacaccacagatttgattttt
gaggtatctgaatttgtggataatgaacatttaacagaatttgaagcattgctggctcaa
attagcccaagagaatgtattatacctaatgggaattcatcagagttaatcaatctcaaa
aacatcttagaacggaatggaatacttgtggctcaagtgaagaaatctgattttagctct
gatgatataattcaagacttgaatagactgttgttttttcaagttcgccagccaagaaat
tctgaaagaattcctgagacaaatttaaatgaagccatgagttgcttaagggcagtaatt
tccttcctaaatcttactggcagcgagacaaatttcaaccaatacagattgaaaactgta
gatgcccacagacatgtacgaatagataatgctgctctttatgctctcaacattttgcct
aagcccactttcaacagtgaaggagctccagtttttactgcatctggcaaagcttacagc
ttaattggaattttaaatcattgtgcaaccccacaggggaagagattattagagcaatgg
ataaaacaaccgttaaaagatgtaaatataattaaagaaagactggatattgtggagtgt
ttagtacacaacctagaactacagtcagccattagtaaggaggctctaaagagaattcca
gatttaatgttattgtctaagaaattatctggtgaaaaagcgaagttacaagactgttac
cgattgtatcaagcaatcaactatttgccttctttagtaggcatgcttagtaagataaat
aataaatcagtgaaggatgtcattgtatctccgttgggggaactccttgctgatatggcc
aaatttcaaacaatgattgagaccttattggatttgaatttagttgacaggggggaatat
cttatcaaaagcaacgtaagtccagaactcaatgaattgcataaacgcaaagaaagcatt
gaggagaagatgcaaaatctcttacataaggctgcaaaggacttatctttggaggagggt
aaaaccattaagttggaattcacctctcagcatgggtacttctttagaatcaccaagaag
gaggaacatgctttaagacatgcaaaaagttacaaaattatcgacgctgtagccggcgga
gtccgattcaggaatgaaaatttaaatttacttaatgaaaaatattcctcaatcaatgaa
agctttgaggcccttcagaaagaaatggtggatgagatgctcacagtggcagcaggatat
gcagatactgtgcgcagcattaacatggttcttgccactttggatgtgctcacttcattt
gctatagcttcagtgtcagccaaaatcccttatattcggcctatactgaagaccgatggg
gaaagagtattgaaactcgagaaggttcgacatccatgtctagagcaccaacttccccaa
gattttattccaaacgacgtaaattttaatcaaaaggacaaaacattctacataatcacc
ggacccaacatgtgtggcaaaagcacctatatcaggtccataggagtgtgcgtgctgatg
gctcatattgggtgtttcgtgccttgcgaaaacgcagaaatgtcgctggtagatggaatt
ttggctcgagtgggagcagacgattgtcagctgaaggggttatccacttttatgttagaa
atgatcgaaacttctaccatattaaaaaccgccaccgagaactcacttgtgattattgat
gaattggggagaggcacatctacctacgatggatgcggcattgcgtgggccatagcagaa
catttagccacagacgtgaaaagtttttcgttatttgccactcatttccataaaataacc
aaacttgtcgatagtagtccctcagttgggaatttgcatgtatcagctatgtgttcgaac
gactcaataatgccactctataaagtgaaacctggagagtgtgacaaaagctacgggata
cactgtgcgaaaattgcagaatttccgattgaagtgttggattgggcctcggacaattta
aaagagttggaacatcaggaggggatgaagtttatggaggaactggaagctgaggagaag
aaagctataatagaaaaaggagatgagcacgtaagaatggcactgagaacgctgaaagaa
atttttgaaggacaggaggcaaatgctttggagcattctttaagtcgcattaggtcagaa
atgcgcagtcaagataatttgtttgttaaagggatgttatcgaaatga
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