Euwallacea fornicatus (polyphagous shot-hole borer): 136344249
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Entry
136344249 CDS
T10685
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136344249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efor03019
]
136344249
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136344249
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
136344249
NCBI-ProteinID:
XP_066147623
LinkDB
All DBs
Position
16:3412455..3413770
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AA seq
273 aa
AA seq
DB search
MAEEYRALYPLKYYRDHISQDFRTDGRQFLDFRPILINTRSISTADGSAIVKIGKTTIVC
GVKAELCKPKPHTSDEGFLVSNLELPPSCSSKFRSGPPSNQVQVFRKLIADIIESSRCIN
LKELCILKGKLAWCLYVDFICLDYDGCVVDACLIALSACLKTVTLPYVDYDPALDIKQVN
LEHRIPIKVYCSLVATTFAIYDDKIILVDPTIEEEDLGTGTVTIVVKEDELCCVHKPGGT
PLSEEDLLELIEKSKKRGGSVRELINAAVKNST
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaatacagagcactgtaccccttgaagtactatagagaccacatttctcaa
gatttcagaacggatggaaggcaatttctagattttagacccatcctaataaatacaaga
tcaatatccactgctgatggttctgcaattgttaaaattggcaaaaccaccatagtatgt
ggagtgaaagcggagctgtgcaaaccaaaaccacatacttcagatgaaggttttttggta
tccaacttagagttgcccccttcatgttcatcaaaatttaggtctgggcctcctagtaat
caggtccaagtgtttagaaaacttattgcagatataatagaaagttctaggtgcatcaac
ttaaaggaattatgtattctcaaaggtaaactagcctggtgtctctatgtagatttcata
tgtctagattatgatggttgtgtggttgatgcctgtttaattgctttatccgcctgttta
aagactgtaacactaccttatgttgattatgatccagctttggatattaaacaagttaat
ttggaacacaggatacctattaaggtatattgcagtttggttgccactacatttgctatt
tatgatgacaaaataattctcgtcgatccgacaatcgaagaagaggatttaggtactggt
accgtcacaattgtggtgaaagaggatgaattgtgttgtgtacacaaacctggaggaact
cctctgtcagaagaagacctattagagttaattgagaagagcaaaaagagaggaggtagt
gttagagaattaattaatgcagctgtaaaaaatagcacttaa
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