Euwallacea fornicatus (polyphagous shot-hole borer): 136344750
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Entry
136344750 CDS
T10685
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136344750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efor03021
]
136344750
03019 Messenger RNA biogenesis [BR:
efor03019
]
136344750
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136344750
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
136344750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_4
zf-CCHC
zf-CCCH_3
zf-CCCH_2
Nab2-like_zf-CCCH_
zf-CCHC_2
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
136344750
NCBI-ProteinID:
XP_066148580
LinkDB
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Position
17:complement(3893999..3896170)
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AA seq
297 aa
AA seq
DB search
MEYLIANVEHFKFDIEVALDEQYGALPLPFSGMDKSTAAVCQFHSSKNGCANGANCPFRH
VKGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCTNFLSGFCPEGPKCKYMHPRFELPAPPDQKQ
QDKNKPPVIICHFCGEHGHKALHCNKMSEHHRHKEMQAMLNADDGKKEIFGQRPQLKKLE
DVTCYKCGSKGHYANKCPKGHLAFLSQKANQLKNEQLAAQKAMQQTQKEKDLEQNPS
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggagtacctaatagctaacgtggagcactttaaatttgatatagaagtagccctagat
gaacagtatggggccctgccacttcccttttccggaatggataaatccactgctgcggta
tgtcagtttcactcctcaaaaaacggctgtgctaatggcgctaactgtcccttcagacat
gttaaaggcgataggactattgtctgtaaacattggcttcgaggactttgtaagaaaggg
gaccaatgtgaatttttgcatgaatatgacatgacaaaaatgcctgagtgctatttttac
tcgaggtttaatgcatgtcacaacaaagagtgtccttttctgcacattgaccctgaaagt
aaaatcaaggattgcccttggtatgatagagggttctgcaggcacggcccacattgcagg
catagacatgttcgaagagtactctgtacgaatttcctctcaggtttttgccctgagggt
cccaaatgcaaatatatgcatccacgattcgaattaccggctcctccagaccaaaaacaa
caagacaagaacaaacctcctgttatcatttgccatttttgcggtgaacacggacacaaa
gccctccattgcaataaaatgtcggagcaccaccgacataaggaaatgcaagcgatgttg
aacgcagacgatggtaaaaaggagattttcggtcaaagaccgcagttgaagaagctcgaa
gatgttacatgttataagtgcggttctaagggacattatgccaacaaatgcccgaagggg
catttggctttcttgtctcaaaaagccaatcaactcaagaatgaacaacttgctgcgcaa
aaggcgatgcagcaaacacagaaagaaaaagacctggaacagaacccttcataa
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