Euwallacea fornicatus (polyphagous shot-hole borer): 136346036
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Entry
136346036 CDS
T10685
Symbol
U4-U6-60K
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136346036 (U4-U6-60K)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
efor03041
]
136346036 (U4-U6-60K)
Spliceosome [BR:
efor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
136346036 (U4-U6-60K)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_SCAP
WD_LRWD1
WD40_like
Beta-prop_WDR19_1st
WD40_RFWD3
Nbas_N
Beta-prop_WDR75_2nd
Ig_NUP210_9th
DUF7899
Motif
Other DBs
NCBI-GeneID:
136346036
NCBI-ProteinID:
XP_066150973
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All DBs
Position
21:2855666..2857929
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AA seq
508 aa
AA seq
DB search
MSDDEITYVKKTKTIHYGSLEDSERARIEAAEDDEDSNNSEAEPVLPPPPPEEHNEYLEL
EEAMSRDKQALLEEFERRKKARSINVSTDDGEVKRNLRQLGEPICLFGEGPADRRSRLRD
ILSRLGEDSVIRREAEEERKQFEKDQEQTWYHEGPESLIIARLWIAEYSLPRVKERLAEA
KRLQELPSTAKTARTQEVQKRIHQMSIYSSQVGDNRPISYCSFSPNSKLLATASWSGLCK
VWSVPDCQLQQTLKGHTCNVGAIVFHPKATITNEESICNMASCAVDGSVKLWDLKSEEPI
ADIAGHMPHRVSRIAFHPSGRFLGTCCFDCSWRLWDLQQCTEVLHQEGHVKPVYCISFQT
DGSVCASGGLDSFGRVWDLRTGRCIMFMEGHLKSIYGIEFSPNGYHIATASEDDTCKIWD
LRKRSSLYTIPAHNNLISDVKYQKDEGSYMVTASYDGKVKIWRSKTWQPLKTLSGHDGKI
MSCDISPDDNYIATSSYDRTFKLWAPEY
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgatgaaataacttacgttaaaaagacaaaaaccattcattatggttcacta
gaagactcagagcgagcccgcattgaagctgctgaagatgatgaggactcaaacaattca
gaagcggaaccggtccttccgccgcctcccccagaagagcataatgaatatctggaactt
gaggaagcaatgtctagggacaaacaggcattactcgaagaatttgagagacgcaagaaa
gctcgttccattaatgtttccacagacgatggggaagtgaaacgtaacttaagacaattg
ggagaacctatatgtttgtttggggaggggcctgcagatagaagaagtcgtttgagagat
attttaagtcggctaggagaagattcggttattaggagggaagcagaagaagaaagaaag
cagtttgaaaaggatcaagagcaaacttggtatcatgaagggccagaatctttgattatt
gcaagattgtggatagctgagtattctttacctagggttaaagagagacttgctgaggct
aagagattacaggaattgccttcaacagcaaaaacagctaggacacaggaggtccaaaag
agaatacaccaaatgtctatatattcctctcaagttggggacaatagacctatttcttac
tgctctttttcacccaattcaaagctactagcaactgcatcctggagtggtttatgtaaa
gtttggtctgtgcccgactgccagttacagcaaacacttaaaggacatacatgtaatgta
ggcgctatagtatttcatcccaaagctacaatcacaaatgaagagagtatttgcaatatg
gcctcttgtgcagttgatggatctgtgaagctgtgggatttaaaaagtgaagaacctata
gccgatatcgcaggccatatgccacaccgagtgtccagaattgctttccatccatcagga
agatttttaggtacatgttgttttgactgttcctggagattatgggatttacaacagtgc
actgaagtgttgcatcaggaaggtcatgtgaaaccagtttattgtatatcttttcaaacc
gacggttcagtttgtgcttcaggagggttagattcatttggtcgagtgtgggatttgcga
acaggccgctgtattatgtttatggagggccacttgaagtctatttatgggattgagttt
tctcccaacggctatcatatagccacggcaagcgaggatgacacatgcaaaatttgggat
ctacgaaaacggtcatctctttacactattcctgctcataacaatttaatttcagacgtg
aaatatcaaaaagatgaaggtagttatatggtgactgcctcatatgatgggaaagtaaag
atatggcgcagcaagacctggcaaccattgaaaactctttctggacatgacggaaaaata
atgtcgtgtgatatttccccggatgataattatatcgccaccagttcgtatgacagaaca
tttaaactgtgggcacccgagtattga
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