Euwallacea fornicatus (polyphagous shot-hole borer): 136346261
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Entry
136346261 CDS
T10685
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03013
Nucleocytoplasmic transport
efor03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
efor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
136346261 (Upf2)
mRNA cycle factors
P-body specific factors
136346261 (Upf2)
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GFIT
Other DBs
NCBI-GeneID:
136346261
NCBI-ProteinID:
XP_066151379
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Position
22:complement(3025096..3029727)
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AA seq
1130 aa
AA seq
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MAVDTIEIVLPEEEYKEDPSLIETETNELKAYIKDVENKLKIKQELRAANQNASQTRPGD
SHFTKLDSSLKKNTAFVKKIKNFSASQIDTYIKDMSGLNLSKYISEVAAAIVDSKLKMTD
VSAAVKLCGILHQTYLEFSQHLFENWQKALAVKINEKVQNPSKLRVDLRFYAELLQAGVL
SNKNSFALLGTVLTTLVNMDKEEHVNVAIILSFCKHCGDDYAGLLPRRIRQLSAKYEMSI
PKSGFLPQDKQQNVRGLLKEYYLSLSKHLVKDHQELQNFEKQNVKILQTKGELSQERKEK
HESLQSFYDKLLANTQSFAETLDEDMPTLKVQNIPKTDENMIVTGSGADFEDNASNVENI
WCDMETQKFYCDLPELRVFLPTAFLKNQPPPPPAETVTEDVLDSELPVEDEQEDSKSEEA
PPATEEDTEDQTSTNASNKIVLEAFLNNLPNCVNREMIDNAAIDFLVTLNMKHNRRKLVK
ALFGVNRTRLDLLPFYARFVAILYPALPEVGNDLCQMLRQDFKFHVKKKDQINIESKIKV
VRFIGELVKFKLYSKIEALYCLKVLLHDFSHHHIEMACNLLEVCGRFLYCSPDSHQRTKV
YLEQMMRKKTVMTLDSRYVTQIENAYYYVNPPEVVTVAQKERPVMHQFIRKLLYQDLQKN
NTDKIIRLMRKLDWGTEETAMYAIKCLTGAHNTKYFNIRCLASLLSGLVGYQEEIGTKVV
DGVLEDIRLGMEVNLPKFNQRRVAQIKYLGELYNYRMVESGDVFKVLYSLISFGVSIDPN
EPSSLDPPSHLFRIRLACVLLETCGTYFSSGSSKRKLDYYLVFLQMYYWYKKEMWKELFP
PTLEHIFKETLSILRPKLKLVQSYEEAQAEVNNIRTILGIEQLVSTSIRKEDEDGLDTIA
ETDNEDGGDDDVSESATAPVTDDTATEDETGDHNTQDSDDEGEMDTSEAEADQVSESLAI
PKGPKKMDCPEDNDFLSALDKMVSENIQERMREPVKAGNIDISVPVVLKSNAKKNYEQLQ
ETTDNGKQRIGFVLMMRKGNKQQYKQFEAEADSELVQNLKDQEQAQKEEKERVKRLTLNI
TERFEEEDYQESISQQTRPVTQNLNRERKKYQHPKGAPDADLIFGPKKMR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggatacaatagaaatagtccttccagaggaagaatataaagaagatccctcc
ttaattgagacagaaacaaatgaattgaaggcttacatcaaggatgttgaaaacaaactt
aaaatcaagcaagagttaagagcagcaaatcaaaatgcctctcagacaaggcccggtgat
tcccacttcaccaaacttgactccagtttaaagaaaaatacagcttttgttaagaaaata
aaaaacttttcagccagccaaattgatacttacattaaagatatgtctggtcttaatttg
tccaaatacatatcagaagtggcagctgcaattgttgactcaaaactcaagatgactgat
gtctctgcagcagttaaattgtgtggcattttgcaccagacttatttggaattttcccag
catttgtttgaaaattggcaaaaagctttagcagttaaaatcaatgaaaaagtgcaaaat
cctagtaagctgagggtggatttaaggttttatgctgaattgttgcaagctggtgtttta
tcaaataaaaattcttttgctctcttggggactgtgttgactacattagttaacatggat
aaggaggagcacgttaatgttgccattattctaagcttttgcaagcattgtggtgacgat
tatgcaggattgctacctagaaggattaggcagctttcagcaaaatatgaaatgtctatt
cctaagagtggatttttacctcaagacaagcagcaaaatgtcaggggtctattaaaggaa
tattacttatcactaagtaagcacttagttaaagatcatcaagagttgcaaaactttgag
aaacaaaatgtaaagatattacaaacaaaaggggaattaagtcaagaaaggaaagagaag
catgaaagtttgcaatcgttttatgataaactactggcaaacactcaaagttttgctgag
actcttgatgaagacatgccaacacttaaagtacagaatataccaaaaacagatgaaaat
atgatagtaacagggtcaggcgctgattttgaggataatgcttctaatgttgagaatatc
tggtgtgacatggaaacccaaaagttttattgtgatttgccagaattgagagtgtttcta
cccactgcctttttgaagaatcagcctccaccaccaccagctgagactgttacagaagat
gtgttagattctgaattgcctgtagaagatgaacaggaagacagcaaatctgaagaagcc
cccccagcaacagaagaagatactgaagaccaaacatctactaatgcaagcaataaaatt
gtcttggaagcctttctcaataatctcccaaattgtgtaaatagagaaatgatagacaat
gcagccatagacttccttgtaactttaaatatgaagcacaataggagaaagcttgttaaa
gctttatttggtgttaatagaactagattagacctacttccattctacgcccgtttcgtg
gctatactttaccctgcactgcctgaagtggggaatgatctctgtcaaatgcttcgtcag
gattttaaatttcacgttaagaaaaaagatcaaatcaatatcgagtcgaaaattaaagtt
gtgagatttattggagaactagtcaagtttaaactttattcgaaaattgaggcgctttat
tgtttgaaagtattgttgcatgatttttcccatcaccatattgaaatggcgtgcaattta
ttggaggtgtgcggtaggtttctgtactgcagccctgattcgcatcagcggactaaagtt
tatttagagcaaatgatgaggaagaagactgttatgacattggattcgagatatgtgact
caaattgaaaatgcgtattattacgtgaacccgcctgaagtggtcactgtggcccagaaa
gagagacctgtaatgcatcaattcatccgtaagcttctgtaccaagacttgcagaaaaac
aacacagacaaaattatccgtttaatgcgtaaactggattggggaactgaagaaactgcc
atgtacgctataaagtgtttgaccggtgctcataatactaagtacttcaatataagatgc
ttggccagtcttttgtcaggcctagtcggttaccaagaggaaatcggcactaaggtagtg
gatggggttttggaggacattagattgggaatggaggttaatctaccgaagtttaatcaa
aggcgtgtcgctcaaattaaatatttaggagaattatacaattaccgaatggtagagagt
ggcgatgtgttcaaggtgctttattcattgatatcattcggagtatcgattgacccaaat
gaaccatcgagtttagatcctccaagtcatttattccgcattagattagcctgtgtttta
ttggagacttgtggcacttatttcagcagcggcagcagtaagaggaaactagattactat
ttggtgttcttacagatgtattactggtacaaaaaggaaatgtggaaagagttgtttccg
cccactttagaacacattttcaaggaaacattgtctattttaaggcccaaattgaagctg
gttcaaagctacgaagaggctcaagcagaggttaataatatacgaactattttgggtatc
gaacaattagttagcacttctatacggaaagaagatgaggatggattggataccattgcg
gaaactgacaatgaagacggaggggatgatgatgtgtctgaaagtgcaactgctcctgta
acagatgatactgccacagaagacgaaactggtgaccataatactcaagattctgatgac
gaaggtgaaatggacacaagtgaagcagaggcagatcaagtttctgagtctttggctatt
cctaaaggaccgaaaaaaatggattgtccagaagacaatgattttctgagtgctttggat
aagatggtgtcggaaaatattcaggagaggatgcgtgagcctgttaaagctggaaacatc
gacatttcagtaccggtggtgctcaagagcaacgccaagaaaaattacgaacagttacag
gaaaccacagataatggaaagcaacgaatagggtttgtcctcatgatgcgtaagggcaac
aaacaacaatacaagcaattcgaagcggaagccgattccgaactggttcaaaacctgaaa
gaccaagagcaggcccaaaaagaagaaaaagagcgagtgaaaagactgactctcaatatc
actgaacggttcgaagaagaggattatcaagaatctatttcgcagcaaacaaggccggtt
acgcaaaatttgaatcgcgaacggaaaaagtatcaacacccgaaaggggcgcccgatgca
gatttgatatttggccccaaaaaaatgcgataa
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