Euwallacea fornicatus (polyphagous shot-hole borer): 136346465
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Entry
136346465 CDS
T10685
Symbol
Spt6
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efor03021
]
136346465 (Spt6)
03036 Chromosome and associated proteins [BR:
efor03036
]
136346465 (Spt6)
Transcription machinery [BR:
efor03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
136346465 (Spt6)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
136346465 (Spt6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
SH2
S1
HHH_9
Spt6_S1
HHH_3
Tex_YqgF
Tex_N
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
136346465
NCBI-ProteinID:
XP_066151737
LinkDB
All DBs
Position
23:2380179..2389667
Genome browser
AA seq
1742 aa
AA seq
DB search
MADFVDYEAEESSEEEELDSHDRKKLKKVKAMDDSSEEEEDDDDRLREELKDLIDDRPIE
ESDGEDSDASGGEKRKKSDDEDLDDRLEDEDYDLLEENLGVKVERRKFKRLRRIRDEESE
GEDDHDQEQEREQIANDLFSDDEKDAKDDERQSERSHRPAPEPEHFGEEEDEGEYSDADD
FIVDDEGKPIGKRKKKPIFSDAALQEAQETFGVDFDYDEFSKYDDEYDEDEEEDEDDEYE
EDEEGERRRKHKKAAKKRPTKKSIFEIYEPSELKRGFFTDLDNEVRGTDIPERMQLRDVP
ITAVPEDSTELDDEAEWIYKQAFCKNTVSNIDANLTAEAREKLRKGPQTIGKIRKALDFM
RNQQLEVPFIAFYRKEYVQPELNINDLWKVYKYDAKWCQIKSRKENLLSLIEKMRSYQMD
EVMKNPDAPLSENIRLIRDADIENLRKVQTAEELNDVHNHFILYYAQDLPAMHAAWRVKE
KERRKQERRTARLKALAESEEGADVTEEIPDDDQDDESGPDTIKYANRSGSYSLCMRAGI
YSLAKRFGLTPEHFAENLRDNYQRHDVDQEQTEPSEVAKEYISAKFQTVDDVLQAAKYMV
ALQIAREPLVRKCIREVFYERAKISIIPTKKGQKVIDESHNCYSLKYVKNKPVRDLTGDQ
FLKLTLAEEEQLLKIKISDNIEGHTSSSYVDEVKQLYIRDEFSKNVQEWNKVRAECVERA
LTRCVLPDLQTELKGVLLSEAKEFVLRACCRKLYNWIKLSPYQVEFPEEDEDEWDTSKGI
RVMGLAYVPDYSQSAFTCIAAPDGDITDYLRLPHILKRKNSWRMDEKLMKEADLTALRNF
IFTKKPHVIAIGGESRETLMIAEDLRGVVSELAESEQFPAIKVEIIDNELAKVYANSNKG
VSDFRDYPELLRQAISLARKMQDPLIEYSQLCNSDEEILSLRLHPLQEQITKEELLEALC
LEFVNRTNEVGVDVNLAVQQAHKSHLIQFICGLGPRKGQALLRVLKQTNQRLENRTQLVT
ACHMGPKVFINCSGFIKIDTNSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDD
EGANPAGALEEILETPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNCRYKDLRMP
YRSANPEELFDMLTKESPETFYIGKMVQATVIGIARRKPQGEQLDSANPVRNDETGLWQC
PFCLKNDFPELSDVWNHFDAGSCPGQATGVKLRLDNGISGYIYIKNLSDKMVSNPEERVG
VGQLIHCRITKIDVERFSVDCTSKSSDLLDKNHEWRPPRDPYYDQEQEDKDNRVEAEKKK
NKQRQTYIKRVIVHPAFHNISYTEAEKFMANMDQGEVIVRPSSKGVDHLTITWKVAEGIC
QHIDVKEQGKTNAFSLGKSLWIGNDEFEDLDEIIARHVHPMASYARDLLTFRYYKDTGGG
LKDKAEEFIKEEKKKNPSKIHYIIGASKNFPGKFLLSYLPRARVKHEYVSVTPEGFRFRQ
QLFDSVATLFKWFKEHFRDPIPGGTPSTPRVGGTTGRTPYQGAATTPFNSMNLEAIQRVA
QNLPSHTLQSLSAVANQTPHYPHTPGGAYGANYINTPYTPSGQTPFMTPYQTPHAHQTPR
YGQSTPSPVQSMMGSGPFLHPGAVTPSSQISSSPYSRSSQRNHSGHSMPPPHRRHGGPGG
YRFSGSGSGSADLDWQKAAEAWASRSRPGSIGQRTPRSTPQTNFSPHSMSLGDGTPLYDE
NI
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggccgatttcgtcgactatgaagcagaggaaagtagtgaggaggaggagttggattcc
catgaccgaaagaaactcaagaaagttaaagccatggacgatagttctgaggaggaagag
gatgatgatgacagactcagagaagaattaaaagacttgattgatgacagacccattgaa
gagagtgatggtgaagactcggatgcttctggtggggaaaaaagaaaaaaatctgatgat
gaagacttagacgatagacttgaagatgaagattatgatttgctggaggagaatttaggt
gttaaagttgagagacgaaaatttaaaagattgagaagaatccgggatgaggagagtgag
ggagaagatgatcatgatcaagaacaagaaagggagcaaattgccaatgatttgttttca
gatgatgaaaaggatgccaaggatgacgaaaggcagtctgagcgtagtcatcgtcctgcc
cctgaacctgaacactttggggaagaagaagatgagggagaatattcagatgctgatgac
tttatagtagatgatgaaggcaagccaataggcaaaaggaagaagaagccaattttctca
gatgcagctctccaagaagcacaagaaacatttggagttgacttcgattatgacgagttt
tccaagtatgatgatgaatatgatgaggatgaggaggaagatgaagatgatgaatatgaa
gaagatgaggaaggtgaacgcaggcgaaaacataagaaagctgctaaaaaacgccctacc
aaaaagtcaatttttgagatttacgaaccttcagagcttaaacgaggctttttcacggat
ttggacaatgaagtgcgaggcacagatattcctgaaagaatgcagttacgcgatgttcct
attactgccgttcctgaagattcaactgagttagacgacgaggccgaatggatttataaa
caggcgttttgcaaaaacaccgtttccaatatcgacgcaaatttaactgcagaagctcgc
gaaaaactacgcaaaggacctcaaactataggcaagatacggaaagctctggattttatg
cgcaatcagcagctggaggtgccattcatagcgttctatagaaaggaatatgttcaacct
gaattgaacattaatgatttgtggaaggtttacaagtacgatgcaaagtggtgtcaaatc
aagagccgtaaagaaaacctactgagtttgatagaaaagatgaggtcttatcagatggat
gaagttatgaagaatccagacgcgcctctctctgaaaatattaggcttataagagatgcg
gatatagaaaacttaaggaaagtgcaaacggcggaagaactgaatgatgttcataatcat
tttattttgtattatgcccaggatttgccagcgatgcatgcggcctggagagtgaaggaa
aaagaaagaaggaaacaagaaaggcgtactgcaagattaaaggctttagccgaatccgag
gagggtgcagatgttacggaggaaattcctgatgatgatcaggatgacgagtcaggacct
gataccatcaagtacgcaaataggtcaggttcctattcattgtgtatgcgagcgggtatc
tactctctagcaaagagatttggcttaactccggaacatttcgccgagaatttacgagat
aattaccagagacatgacgttgaccaggaacagactgaaccaagtgaagtagctaaagag
tacatttcagcaaagtttcaaaccgttgatgatgttttgcaggcggccaaatatatggtg
gctttacaaattgccagagaaccactagtacgcaaatgcattagagaagttttctacgaa
agagcgaaaataagcataattcctacaaaaaagggacagaaagtaatcgatgaatctcat
aattgttattccctgaaatacgtaaaaaataaaccggtgcgagacttaaccggagaccag
tttttgaaattgacccttgcagaagaggaacagctgttaaaaataaagataagcgacaat
attgaaggtcatacttcgtcttcgtatgtcgacgaagtaaaacagctctacattcgagac
gaatttagtaaaaatgtccaggaatggaataaggtacgagctgaatgtgtagagcgggcc
ttgacgcgttgtgttttgccagatctgcaaactgagcttaaaggggttctcttgagcgaa
gccaaagagttcgtgcttagggcttgctgtaggaaattgtacaattggattaaactttct
ccctatcaagtggagtttccagaggaagatgaagatgagtgggacacgagtaaagggata
agggtgatgggtctggcttatgttccggactattctcaatcggcgtttacgtgcatagcg
gcgccagatggggatataacggattacttgagattaccacacattctaaagaggaagaac
agttggagaatggatgaaaagttgatgaaagaggccgatttgacagcgcttcgcaacttt
atttttaccaaaaaaccacatgtgatagccatcggcggtgaatcacgcgaaaccttaatg
atcgccgaggacctacggggagtcgtaagcgaattagccgagtctgagcaattccctgca
attaaagtagaaataattgacaatgaactggctaaagtctacgctaattcgaacaaaggc
gtatctgattttagagattacccagaattactgagacaggctatatctttggcccgtaaa
atgcaggatccgctaattgagtattcacaattgtgcaatagtgatgaagaaatattaagc
ttgcgcctgcacccactgcaagaacaaattaccaaagaggagttgctagaagcattgtgt
ctggaatttgtcaatagaacaaatgaagttggcgtggacgtcaatttagcagtccaacag
gcgcataaaagccatctgattcaatttatctgtggtttagggcctagaaaaggtcaagca
cttttgagagtgttaaagcagaccaatcaacgtttggagaatagaacccaactcgtaaca
gcctgtcatatgggaccgaaagtgtttattaactgttctgggtttataaagatcgacaca
aatagtttgggtgacagcacagaggcctatgttgaaattttggacggctcgagagttcac
ccggagacatacgaatgggctcgaaaaatggctgtggatgcattggaatatgacgacgac
gaaggagctaatcctgccggtgccttggaggaaatcctcgaaactcctgagcggttaaaa
gatctggatttggacgcctttgccgaggaattggaacggcaaggatttggcaacaagagt
ataaccttatatgacatcagagccgaattgaactgtcgctacaaagatttgagaatgcct
taccgctcggccaaccctgaagaactatttgatatgcttaccaaggaatcacctgagact
ttttacattggcaaaatggtacaggccactgtaatcggaattgcccgcagaaagccacaa
ggtgaacaactggattctgcaaatcccgtccgtaacgatgaaaccggattgtggcaatgt
ccgttctgtctgaaaaacgattttcctgagctttccgacgtgtggaaccattttgacgcg
ggctcctgcccgggtcaggctactggtgtgaaactccgactcgataacggaatttctgga
tatatttacatcaagaatttgagcgataaaatggtgtcgaatccagaggagcgagtaggt
gttggacagttgatacattgtaggataacgaaaatcgacgttgagaggttttccgtggat
tgcacatctaagtcgagcgatttacttgataagaaccacgagtggaggccaccaagagac
ccatattacgatcaggaacaagaggataaagataatagagtcgaagcggaaaagaaaaaa
aataaacaacgacagacatacatcaaacgagtgatcgtccatccagcattccacaacata
tcctataccgaagccgagaagtttatggctaacatggaccaaggggaagtaatagtccga
ccgtccagcaaaggagtggatcacctgactataacgtggaaagtagcagaaggcatttgt
cagcacattgacgttaaggaacaaggaaaaaccaacgctttttcattgggaaaatcactg
tggataggcaacgatgagtttgaagatttagatgaaatcattgcccgacatgttcatcca
atggcttcttatgccagggatttactgactttcagatactacaaagacactggtggcggt
ctaaaagacaaagctgaggaatttattaaagaagaaaagaaaaagaatccttcaaaaatt
cattatattatcggcgcatccaaaaattttcccggaaagtttctgctctcttatcttccc
agagccagggttaaacacgaatacgtcagtgttacaccagaagggttccgctttagacag
caattgttcgattcagttgcgactctttttaaatggtttaaagagcacttcagggatccc
atcccgggaggaacccctagtactcctcgcgtcggcggcacaaccggaagaacaccttat
caaggtgctgctactactccgtttaacagtatgaatctagaagccattcaaagggtggcc
caaaacttgcctagccacactttgcagagtttatcggctgtggcgaatcagaccccacac
tatcctcatactcctggtggagcatatggagccaattatattaacacgccgtacactcca
agtggacaaactccatttatgacaccgtatcaaacgccgcatgcacatcaaacgccaagg
tacgggcagtctacaccttctccagttcagtcaatgatgggctccggacctttcctccat
cccggagctgtgacaccttcgagtcagattagttctagtccctattctcggtctagccaa
aggaaccactcggggcatagtatgcctccaccacacaggagacatggagggcctggtgga
tacaggtttagtggtagcggaagcggctcagctgatttggattggcaaaaagctgcggaa
gcatgggcatctagaagtagacctggatcaatagggcagagaaccccgaggtccacacca
caaacaaacttttccccacactctatgtcgttaggcgacgggactcctttatatgacgaa
aatatttaa
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integrated database retrieval system
