Euwallacea fornicatus (polyphagous shot-hole borer): 136346705
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Entry
136346705 CDS
T10685
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor04382
Cornified envelope formation
efor04512
ECM-receptor interaction
efor04518
Integrin signaling
efor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136346705
04518 Integrin signaling
136346705
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136346705
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
136346705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efor04147
]
136346705
00536 Glycosaminoglycan binding proteins [BR:
efor00536
]
136346705
Exosome [BR:
efor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
136346705
Glycosaminoglycan binding proteins [BR:
efor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136346705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
136346705
NCBI-ProteinID:
XP_066152169
LinkDB
All DBs
Position
2:5413564..5456469
Genome browser
AA seq
1810 aa
AA seq
DB search
MPLRTGVCWASALAGLVFFAFVTDVQAWGKCSGCSIPVKCNCTGLKGRLGAEGIPGLPGL
RGPPGDNGFPGSLGSKGEKGSDGVYGAMGDKGPRGDAGDRGPTGLPGRPGQTGDIGVPGP
DGLDGCNGTDGRPGSQGTRGYPGSRGIVGPRGPQGLRGEPGEGGGNSIGTKGDWGDSGYD
GLPGLDGPMGPAGVRGYQGPPGVEGPIGPQGLMGIPGLPGDARKGEKGHKGPQGDQGVPG
ERGADTGTQEEGESNMLLQKGQPGDKGLKGERGESGWRGYTGERGRPGVGGRKGSSGSKG
ERGEDGPPGKQGKPGPLGQTGEKGYKGAPGYEGTPGEDGMKGEQGEDGRLGIPGIQGVEG
PPGVYDPLMDQIIDGPIGRQGPTGYPGLPGLSGLPAPPGISGPIGPPGPPGPPGRTGLPG
IKGISIKGERGDDGSPGTPGRTGQPGIPGPTGLSGEKGLKGETIVGPQGPSGIPGLPGYD
GPPGERGDPGDRGFKGFPGIGQPIRGPRGPLGPSGRPGLEGDDGIPGLYGGLGFKGRKGD
DCGICQPGRPGGKGDRGEPGRHGRLGTIGFVGLTGSRGPVGFSGKPGPPGFPGLDGTPGQ
PGMKGPMGSPGLPGLVQLPPRSKMIAEKGDMGAPGLPGQQGPVGDYGLRGAPGDAGTNGV
VGPPGDNGIEGGPGLDGQPGRPGLLGQKGERHQLYKIQLTGDQGYPGHVGVKGVTGATGN
PGRDGETLYMADIKGDVGPQGLRGDAGLPGLPGLTGVRGDNGWQGLPGDEGMPGFSVPGP
EGLKGYPGLIGDEGPRGTAGFYGKPGIDGVPGISGSKGERGDPGQRVLYGDMGLQGPTGQ
KGEPGKEGPPGYPGLPGNSGFGGIKGSKGAPGYSGASGAPGIKGQIGIFIPGQPGLPGLP
GEVGEPGEWGDFGMRGDDGENGAYGLQGAKGDTGDSGFPGLIGDVGDEGIRGFNGPEGLP
GLIGEFGERGDIGYPGPAGLPGLKGLPGQRGLKGLRGDVGPNGPPGLQGEPGEIGQIGQP
GRPGFDGPKGESTFSGQKGEQGDFGLSGSQGFDGRPGLTGPKGLRGDAGTPGIGRPGPPG
EKGDDGIQGLSGGYGFKGEIGDIGELGPPGIRGDIGFPGRDGRRGYDGFPGAKGVIGPTG
FTGVPGLSGLKGLDGEPGKIGRPSLPGPMGEPGERGPIGPKGLKGNRGLPGGTLSAFTVK
GEVGELGMFGLTGLKGARGEPGLIGWPGPRGEIGRVGEIGLRGDFGLEGRPGPRGEPGFN
GPPGLPGQNPEPGESGMSGEDGLVGLQGRSGQKGAPGELGRDGVPGLRGPPGLSITGPKG
IAGDIGFDGRRGPIGLEGLPGNDGRPGLPGIKGLPGDYGFAAISFKGMKGDVGYVGPRGH
DGGKGEPGEPGLDGFFGEQGNSGEIGFPGDIGLPGFQGLPGHIGPRGDVGDWGLDGLPGQ
DGEAGLPGFTGPSGKPGRDGLSGFPGTPGVKGLSGDIGEPGLPGREGSKGFPGPPGLTGQ
LGLQGYPGAPGPKGEPAQPAPLPRSRGFAFARHSQSDYVPVCPRNTVKVWEGYSLLHIHS
EKRTQGQDLGNPGSCVRKFNTMPYLLCNLNNVCDYANTNDYSFWLSTTEPVPMTMTPIYG
YDIQKYISRCSVCEAPTRIIALHSQTNEIPQCPNGWEEMWIGWSFLMGTDGGGQGSTQSL
VSPGSCLEEFRTNPFIECHAHGRCNHYTTALSFWLATIEEYSQFKKPVPQTLKAGFLTTK
VSRCSVCLRRIPSRPDTPPAQYNALPSRLPQPPQNQIPFNPEYKNLANRERNISRRRRPQ
SYGRLYNSQG
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgccgctacgaacgggtgtgtgctgggcgagtgccctcgcaggcctcgtgttttttgcg
tttgtgaccgatgtgcaggcctggggtaagtgctcaggctgtagcatccctgtaaaatgc
aactgcactggactcaagggacgattaggggcagaaggtattcctggactaccagggctg
cgaggccctcctggtgacaatggattccctggaagccttggaagtaagggcgaaaaaggt
tccgatggagtgtatggagcaatgggtgataaaggtcctagaggagatgctggagacaga
ggtccaacaggtctacctggacgaccaggtcaaaccggtgatataggcgtgccaggccca
gatgggttggatggttgtaatggaactgatggccgtcctggatctcaaggtactagggga
tatccaggtagtcgaggtatagtgggacctcgagggcctcaaggtttgagaggggagcct
ggtgaaggtggcggcaattccatagggacgaaaggagactggggtgactcggggtacgac
gggctgccagggcttgatggtcctatggggccggcgggagtgagaggctaccaagggcct
ccaggcgtagaggggccgattggtccgcaaggcttaatgggaatcccgggtttacccggt
gacgctcgtaagggggaaaaaggacataaaggtcctcagggagatcaaggagtgcctgga
gaacgtggagcggatactggaactcaggaggagggagaatctaatatgttactgcagaaa
ggacaacccggggataaaggattgaagggcgaaaggggagaaagcggatggcggggatat
acgggagaaaggggtcggccgggagttggagggcgtaaagggagttccggctccaaaggt
gaaagaggagaggatggtcctccggggaaacaagggaaaccgggcccgctaggccagact
ggggagaaagggtataaaggagcgccgggatatgagggcacacccggggaagatggaatg
aaaggtgaacaaggtgaagatggtagattagggattcccggaattcaaggggtagaaggg
ccgccaggtgtctacgatcccttgatggaccaaataatagacggtcctattggcagacaa
gggccgactggatatcccggtttgcccggtttatcaggtttaccggcacctccgggaata
tccggtcccattggaccaccgggtccccctggtcctcctggacgaacgggtctccctggc
attaaaggcatttcaataaaaggagagcgtggtgatgacggttctccagggacgcctggc
agaacgggacaaccaggaattccaggaccaacagggctttccggagagaaagggcttaaa
ggagaaaccatagttggtcctcagggaccatcggggattccagggctaccaggatacgat
gggccacccggtgaaaggggtgatcccggtgacagaggatttaagggttttccaggaatc
ggtcaaccaatacgtggtccccgtggtcctctcggcccttctggaagacccggactcgaa
ggagacgacggtattcctggattatatggcggtctaggctttaaaggccgcaaaggagac
gactgcggtatttgtcaaccaggtcgccccggaggaaaaggcgatcggggagagcccggg
agacacggacgacttggaactattggtttcgtgggtttaacgggatcgagaggacctgtg
ggtttttccggaaaaccgggtccgccgggtttccccgggctggatggcacgccgggacaa
ccaggaatgaaaggtccaatgggatccccgggcttacctggtttagttcaattaccgcca
agatccaaaatgattgcggaaaaaggtgacatgggagccccaggtttaccaggacagcaa
ggacccgtaggcgattatgggttgagaggtgctcctggcgatgcaggaactaatggtgtt
gtcggaccaccaggagacaacggaatcgaaggtggacctggacttgatgggcaacccggg
cgtcccggcttattgggtcaaaagggcgaacgccatcaactctataagatccaacttacg
ggtgatcaaggttatccaggacacgtaggcgtaaaaggagtaacaggtgctacgggtaat
cctggacgcgacggggaaacactatatatggccgatattaagggagacgtaggtccacaa
ggactccgaggcgatgctggacttcctggtttacctggactgacgggcgtacgaggagac
aacggttggcaaggtcttcccggcgacgaagggatgcccggattctctgtcccgggaccg
gagggattaaaaggatatccaggattaatcggagacgaaggacctagaggcacggccgga
ttttatggcaaacccggtattgatggtgtcccaggcattagtggatctaaaggagagaga
ggagatccgggacagcgtgttttatatggagatatggggctacaaggccctacaggacaa
aaaggggagccgggcaaagagggccctccgggttatccgggattacccggtaattctgga
tttggaggcataaaaggttccaaaggagctcccggatattcgggagcttcaggagcaccc
ggaattaaaggtcagattggtattttcataccaggacaaccgggtctaccgggacttccc
ggagaagtaggggagccaggcgaatggggcgacttcggaatgagaggcgatgatggagaa
aatggagcttacgggctgcagggggcgaaaggagatacaggcgattccgggttcccagga
ttaataggtgacgtgggagacgaaggtattcgcgggttcaatgggccagaaggtttacct
ggattaattggcgaattcggtgaacgtggagatataggttatccgggaccagctggtttg
ccagggctgaaaggtttgcccgggcaacgaggtttgaagggtttacgtggggatgttgga
ccaaatggacctccgggcttacagggtgaaccgggtgaaataggtcaaataggtcaacca
ggtagaccgggttttgatgggccgaaaggagaatcaactttcagcggacaaaaaggggaa
caaggagatttcggattatccgggagccaaggttttgacgggcgtccaggtttaactggc
cctaaaggtttgaggggtgacgctgggacacctgggattgggcgaccgggccctccaggc
gagaaaggagatgatggaattcagggcttatcaggaggttatggatttaaaggagaaatt
ggagacatcggagaacttggacctccaggtattagaggagatataggatttccggggcgc
gacggaagaagagggtacgacggttttccaggtgcgaagggtgttataggaccgacaggt
ttcacgggcgttccgggactgtctgggttgaaaggtctggatggagagccaggtaaaatt
ggtcgaccaagcttaccagggccaatgggagaaccaggagagagagggcctataggacca
aaaggattgaaggggaatcgagggctgcccggtggtacattgtcagcatttacagtgaaa
ggggaggtaggagaattggggatgttcggattgacaggtctaaaaggggctcgaggtgag
cccggtttaataggctggccagggccacgaggtgaaatagggcgtgtgggggagattggt
ttgagaggagactttggtttggaaggacgcccaggaccacgcggagagcccggttttaac
ggacctccaggactaccaggtcaaaatccagagcctggtgaatcgggcatgtctggtgaa
gacggtctggttggacttcagggaagatccggccagaaaggagctccaggcgagttggga
cgagatggagttccgggtctccgaggtcctcccggattatcaataacaggacccaaaggt
atcgctggtgatattggtttcgacggtcgaagagggcccattggattggaaggtttacct
ggaaatgatggtagacccggacttccagggataaaaggactgcctggagattacggattt
gccgctattagtttcaaaggaatgaagggagatgtgggttatgtgggtcctagaggccat
gacggaggaaaaggtgaacctggtgagccaggtttagatggttttttcggcgaacaaggc
aattccggagaaatcgggtttcccggagatattggccttcctggttttcaaggtcttcct
ggtcacattggtcctaggggtgatgttggtgactggggacttgacggtctgccagggcag
gacggggaggctggtttgccaggctttacaggcccttcaggaaaaccgggtagggatggt
cttagcggcttccctggaactccaggtgtaaagggtctaagtggtgacataggagagcca
ggtttacctggtcgcgaaggatctaaaggttttcctggaccaccaggtctgaccggccaa
ctaggtctacaagggtaccctggcgctccgggacccaaaggagaacccgcacagcctgcg
cctcttcctagaagccgtggtttcgccttcgccagacattcgcaatccgattatgtgcca
gtttgtcctaggaataccgtgaaagtgtgggaaggatattctttgttacatattcacagc
gaaaaaaggacgcaaggacaggatctcggtaatccgggcagttgcgttaggaaattcaac
acgatgccttaccttttatgcaacctcaataatgtatgcgattacgccaatacaaacgac
tatagtttttggttgtcaacaactgaacccgtgcccatgaccatgaccccaatttacgga
tacgacattcaaaaatacatatccaggtgttccgtatgtgaagctccaacgagaattatc
gcacttcacagccaaacaaacgaaataccacaatgccccaatggctgggaggaaatgtgg
atcggttggagttttctcatgggaactgacggtggaggacaaggttcgacccaatcgctg
gtatctccagggtcttgcttggaggaattccggactaatcctttcatagaatgtcacgcc
catggaagatgcaaccactatacaacagctctgtctttctggctggccaccatcgaggag
tattcacaatttaagaagccagttccacagactttgaaagcgggatttttgactacgaaa
gtgagcagatgctcggtctgtttacgtaggataccgtctagaccagatactcctcctgca
caatataacgcgctgccttccaggttaccacaaccaccacaaaaccaaatcccatttaac
ccggaatataaaaacttggcgaatagggagcgaaatataagccgcagaagaaggccgcaa
tcatatggacggttatataatagccaaggatga
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