Euwallacea fornicatus (polyphagous shot-hole borer): 136346824
Help
Entry
136346824 CDS
T10685
Symbol
RfC3
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
efor Euwallacea fornicatus (polyphagous shot-hole borer)
Pathway
efor03030
DNA replication
efor03410
Base excision repair
efor03420
Nucleotide excision repair
efor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
efor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136346824 (RfC3)
03410 Base excision repair
136346824 (RfC3)
03420 Nucleotide excision repair
136346824 (RfC3)
03430 Mismatch repair
136346824 (RfC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efor03032
]
136346824 (RfC3)
03036 Chromosome and associated proteins [BR:
efor03036
]
136346824 (RfC3)
03400 DNA repair and recombination proteins [BR:
efor03400
]
136346824 (RfC3)
DNA replication proteins [BR:
efor03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
136346824 (RfC3)
DNA Replication Termination Factors
ELG1-RFC complex
136346824 (RfC3)
Chromosome and associated proteins [BR:
efor03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
136346824 (RfC3)
DNA repair and recombination proteins [BR:
efor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
136346824 (RfC3)
Check point factors
HRAD17(Rad24)-RFC complex
136346824 (RfC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_11
RuvB_N
AAA_assoc_2
AAA_14
AAA_16
ResIII
AAA_5
DUF815
RCF1-5-like_lid
AAA_24
DEAD
AAA_19
AAA_7
PhoH
AAA_30
Mg_chelatase
bpMoxR
TIP49
Motif
Other DBs
NCBI-GeneID:
136346824
NCBI-ProteinID:
XP_066152382
LinkDB
All DBs
Position
24:1019750..1022782
Genome browser
AA seq
329 aa
AA seq
DB search
MVSNDQKVNLPWVEKYRPRTLEDLVSHDDIINTVSKFIREDQVPHLLFYGPPGTGKTSTI
LACARQLYTPNQFSSMVLELNASDDRGIGIVRGQILTFASTRTIFKSRFKLIILDEADAM
TMDAQNALRRIIEKYTENIRFCIICNYLSKIIPALQSRCTRFRFGPLAPEQIMPRLNYVI
DEERVQISEDGKNALITLAKGDMRKVLNVLQSTWLAFKDVTEDTVYTCVGHPLRRDIENI
VKWLLNDDIKTTYKNIQELKTLKGLALTDILTEVHNFVLRIEFPFETLIRLLDKMAEVEY
RLSQGANENIQLTGLISSLQFAKHIKPPE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggtatcaaatgaccagaaagtaaacctcccttgggttgaaaagtatagacctcgcact
ttagaagatcttgtctcacatgatgatattataaacacagttagcaaatttatcagagaa
gaccaagtaccacatcttttattctatggtccaccaggaactggaaaaacgagtacaata
ttggcatgtgcgcgacagctttacacaccaaatcaattttcttcaatggtattagagttg
aatgcttccgacgataggggtataggcattgtaagagggcaaatattaacttttgctagt
actagaactatttttaagagtcgatttaaattgattatattagatgaagctgatgctatg
actatggatgctcaaaatgctttaagaagaattattgaaaaatacactgaaaacatcaga
ttctgtataatttgcaactatttgagcaagatcatacctgcgttacaatcaaggtgcaca
aggtttcgattcggtcctttagcgccagaacaaataatgcccagattgaattatgtgatt
gatgaagagagagttcaaatatctgaagatggtaagaatgccctaataactctagcaaag
ggcgatatgcgtaaggtgcttaacgtgcttcaaagcacttggttggctttcaaagacgtc
actgaagatacggtttacacttgtgtgggccatccgttgaggagggatattgagaatatc
gttaaatggcttctaaatgatgatataaagactacgtataaaaatatccaggagttaaaa
accctaaaaggtttagctctgactgacatattaactgaggtgcacaactttgtgctgaga
attgaatttccattcgaaacattgatacgacttttggataaaatggctgaagttgagtat
agactatcacaaggggcgaatgaaaatatccagttaacaggcctaatctcatcccttcag
ttcgctaaacatattaagccgcctgaataa
DBGET
integrated database retrieval system
